RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 COPZ1P61923 177 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 RASGEF1BQ0VAM2 473 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 MRPL2Q5T653 305 aaKnown RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 PAMR1Q6UXH9 720 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 MTDHQ86UE4 582 aaKnown RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 PIGXQ8TBF5 258 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 ABHD3Q8WU67 409 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 ROBO4Q8WZ75 1007 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 WFIKKN1Q96NZ8 548 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 SRXN1Q9BYN0 137 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 KLHL4Q9C0H6 718 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 A0A1W2PP18 115 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 TFPIP10646 304 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 ETS2P15036 469 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 NR1H2P55055 460 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 EPS8Q12929 822 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 EXOC3L2Q2M3D2 409 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 KRT73Q86Y46 540 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 FUNDC1Q8IVP5 155 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 TUSC5Q8IXB3 177 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 BHLHE22Q8NFJ8 381 aaPredicted RBP12.42□□□□□ -0.42
SEC13-204ENST00000397099 BBS10Q8TAM1 723 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 CNOT9Q92600 299 aaKnown RBP12.42□□□□□ -0.42
SEC13-204ENST00000397099 ALPK1Q96QP1 1244 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 PSD2Q9BQI7 771 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 EBF4Q9BQW3 602 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 QRSL1Q9H0R6 528 aaKnown RBP12.42□□□□□ -0.42
SEC13-204ENST00000397099 CXXC4Q9H2H0 198 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 PLEKHF2Q9H8W4 249 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 NGBQ9NPG2 151 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 CTPS2Q9NRF8 586 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 SLC6A13Q9NSD5 602 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 KLHL28Q9NXS3 571 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 CLEC4AQ9UMR7 237 aa12.42□□□□□ -0.42
SEC13-204ENST00000397099 IGKV3D-15A0A087WSY6 115 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 TMED7-TICAM2A0A0A6YYA0 188 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 A0A1W2PNR3 127 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 EDF1O60869 148 aaKnown RBP12.41□□□□□ -0.42
SEC13-204ENST00000397099 SLC35A1P78382 337 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 KEAP1Q14145 624 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 POU4F3Q15319 338 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 AGKQ53H12 422 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 BEX5Q5H9J7 111 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 WBP2NLQ6ICG8 309 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 Q6ZT83 130 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 OLIG3Q7RTU3 272 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 GALNT5Q7Z7M9 940 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 ADGRG3Q86Y34 549 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 TMEM19Q96HH6 336 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 NAA11Q9BSU3 229 aaPredicted RBP12.41□□□□□ -0.42
SEC13-204ENST00000397099 ADAM19Q9H013 955 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 TMEM181Q9P2C4 612 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
SEC13-204ENST00000397099 TMED7Q9Y3B3 224 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
SEC13-204ENST00000397099 CLDN24A6NM45 220 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 NR5A2O00482 541 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 SMAD9O15198 467 aaKnown RBP12.4□□□□□ -0.42
SEC13-204ENST00000397099 FESP07332 822 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
SEC13-204ENST00000397099 CD99P14209 185 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 HOXB9P17482 250 aaPredicted RBP12.4□□□□□ -0.42
SEC13-204ENST00000397099 NCF2P19878 526 aaPredicted RBP12.4□□□□□ -0.42
SEC13-204ENST00000397099 FPR1P21462 350 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 CXCR1P25024 350 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 OR3A2P47893 321 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 SLC16A1P53985 500 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 ITGADQ13349 1161 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 MAPK11Q15759 364 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 ZNF311Q5JNZ3 666 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 C1QTNF12Q5T7M4 302 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 ABLIM2Q6H8Q1 611 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 REEP3Q6NUK4 255 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 TFAP2EQ6VUC0 442 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 HSD17B8Q92506 261 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 ZNF524Q96C55 264 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 AURKBQ96GD4 344 aaPredicted RBP12.4□□□□□ -0.42
SEC13-204ENST00000397099 ZNF607Q96SK3 696 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 POTEKPQ9BYX7 375 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 PIF1Q9H611 641 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 TMEM38AQ9H6F2 299 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 PARPBPQ9NWS1 579 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 LEF1Q9UJU2 399 aaPredicted RBP12.4□□□□□ -0.42
SEC13-204ENST00000397099 OSGIN1Q9UJX0 560 aa12.4□□□□□ -0.42
SEC13-204ENST00000397099 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 ANGPT2O15123 496 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 TMCC2O75069 709 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
SEC13-204ENST00000397099 PGM3O95394 542 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 C1QCP02747 245 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 GPIP06744 558 aa12.39□□□□□ -0.43
SEC13-204ENST00000397099 ARAFP10398 606 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms