RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PCDHGA10Q9Y5H3 936 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PCDHA9Q9Y5H5 950 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 HIVEP2P31629 2446 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 M0QX08 132 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CDC14BO60729 498 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PGRP06401 933 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 OPRM1P35372 400 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MC3RP41968 323 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF83P51522 516 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CBFBQ13951 182 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MELKQ14680 651 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CYBRD1Q53TN4 286 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 JMJD6Q6NYC1 403 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 FAM217AQ8IXS0 508 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PPP1R35Q8TAP8 253 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CD200R1Q8TD46 325 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MVB12AQ96EY5 273 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MCHR1Q99705 422 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 TM9SF2Q99805 663 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PRSS21Q9Y6M0 314 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 TDRD6O60522 2096 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 LOC105369274A0A096LPK9 316 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 HSPB2A8KAH6 182 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 STX16O14662 325 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 HCRTR1O43613 425 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 OR5F1O95221 314 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 IGLV3-25P01717 112 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 DCKP27707 260 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ATP12AP54707 1039 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 EMX2Q04743 252 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 DPTQ07507 201 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 C17orf67Q0P5P2 114 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 AQP6Q13520 282 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RBM39Q14498 530 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 HSPB2Q16082 182 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 C6orf141Q5SZD1 244 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CPZQ66K79 652 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF57Q68EA5 555 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 FCRL6Q6DN72 434 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CYHR1Q6ZMK1 362 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SPARTQ8N0X7 666 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 OR4N4Q8N0Y3 316 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CDRT4Q8N9R6 151 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 LGALS12Q96DT0 336 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 PGAM5Q96HS1 289 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF382Q96SR6 550 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SLC12A9Q9BXP2 914 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 OR10A5Q9H207 317 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 THUMPD1Q9NXG2 353 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CBLCQ9ULV8 474 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 FMO6PO60774 539 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CTNSO60931 367 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SLC43A1O75387 559 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CD2P06729 351 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SPARCP09486 303 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 UBL4AP11441 157 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 PSKH1P11801 424 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 FCARP24071 287 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SSTR4P31391 388 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 TALDO1P37837 337 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CASP3P42574 277 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RAB14P61106 215 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RPS26P62854 115 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SNAPC1Q16533 368 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ODF4Q2M2E3 257 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 DPY19L1Q2PZI1 675 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RNASE12Q5GAN4 147 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SLC25A24Q6NUK1 477 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF517Q6ZMY9 492 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF813Q6ZN06 617 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 OVCH1Q7RTY7 1134 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SYT14Q8NB59 555 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SETD9Q8NE22 299 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 OR1J2Q8NGS2 313 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 C16orf58Q96GQ5 468 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 LCORQ96JN0 433 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZC3H10Q96K80 434 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 Q96MT0 163 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 KAT8Q9H7Z6 458 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF222Q9UK12 451 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 NUP50Q9UKX7 468 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 PI4KAP42356 2102 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 FER1L6Q2WGJ9 1857 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 LOC100130705A0A1B0GUX0 176 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 F5H5K5 113 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 K7ESF4 209 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RNASET2O00584 256 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 MYL12BO14950 172 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 RGS10O43665 173 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 PRKNO60260 465 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 PEX11BO96011 259 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CD59P13987 128 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 TIA1P31483 386 aaKnown RBP eCLIP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 STARP49675 285 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 GPR143P51810 404 aa6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF140P52738 457 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 CLPPQ16740 277 aaPredicted RBP6.05□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF404Q494X3 552 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms