RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF775Q96BV0 537 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 NUPL2O15504 423 aaKnown RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 CHRNB4P30926 498 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 VASPP50552 380 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF691Q5VV52 312 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 OR4M1Q8NGD0 313 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF140P52738 457 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-202ENST00000359082 CTSCP53634 463 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 PGGHGQ32M88 737 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 ELP4Q96EB1 424 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 GALNT9Q9HCQ5 603 aa17.18■□□□□ 0.34
SHANK1-202ENST00000359082 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 FCGR2AP12318 317 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 RTP4Q96DX8 246 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 MED20Q9H944 212 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 BET1O15155 118 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 CYB5BO43169 146 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 IL2RGP31785 369 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 METAP1DQ6UB28 335 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 CBARPQ8N350 705 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 ADAMTS16Q8TE57 1224 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 GIMAP1Q8WWP7 306 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 SUSD5O60279 629 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 MRPS14O60783 128 aaKnown RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 HTR5AP47898 357 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 TMEFF1Q8IYR6 380 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 OR6F1Q8NGZ6 308 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 PGAP3Q96FM1 320 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 IL17CQ9P0M4 197 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 LRIT1Q9P2V4 623 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 HHLA2Q9UM44 414 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 NME7Q9Y5B8 376 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 NSG1A0A0A6YYJ2 146 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 POM121CA8CG34 1229 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 CCR7P32248 378 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 VEGFCP49767 419 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 TAS2R19P59542 299 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 SLC6A19Q695T7 634 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 GLB1L2Q8IW92 636 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 FAM160A2Q8N612 972 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 HAVCR2Q8TDQ0 301 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 METTL9Q9H1A3 318 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 GPR39O43194 453 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 OIP5O43482 229 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 NXPH3O95157 252 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 KITLGP21583 273 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 SYPL1Q16563 259 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 CMSS1Q9BQ75 279 aaKnown RBP17.17■□□□□ 0.34
SHANK1-202ENST00000359082 ULBP2Q9BZM5 246 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF355PQ9NSJ1 428 aa17.17■□□□□ 0.34
SHANK1-202ENST00000359082 H7C1C5 153 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GABRPO00591 440 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 APEHP13798 732 aaKnown RBP17.16■□□□□ 0.34
SHANK1-202ENST00000359082 LCN6P62502 163 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 SORDQ00796 357 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GK3PQ14409 553 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 C2orf76Q3KRA6 126 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 PIANPQ8IYJ0 282 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 RDH10Q8IZV5 341 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 LMNTD1Q8N9Z9 388 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 NRG4Q8WWG1 115 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 SLC6A20Q9NP91 592 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GAPDHSO14556 408 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-202ENST00000359082 CPMP14384 443 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 CPOXP36551 454 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 AADACL3Q5VUY0 350 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 BRICD5Q6PL45 260 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 DNAJC5GQ8N7S2 189 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF436Q9C0F3 470 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-202ENST00000359082 OR1D4P47884 311 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 CLDN17P56750 224 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHANK1-202ENST00000359082 OR51D1Q8NGF3 324 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 OR13C2Q8NGS9 318 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 SGK3Q96BR1 496 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 SMIM14Q96QK8 99 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 ULBP3Q9BZM4 244 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 CYBAP13498 195 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 PKLRP30613 574 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GGHQ92820 318 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 C3orf30Q96M34 536 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GMLQ99445 158 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 AGPAT4Q9NRZ5 378 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 ZDHHC7Q9NXF8 308 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 PTAFRP25105 342 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 PCBD1P61457 104 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 GPR19Q15760 415 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 RTL6Q6ICC9 239 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 KCNIP4Q6PIL6 250 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 PARP16Q8N5Y8 322 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 EID2Q8N6I1 236 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 ST7LQ8TDW4 575 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF286AQ9HBT8 521 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 TXNL4BQ9NX01 149 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms