RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ENPP1P22413 925 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 SLC1A3P43003 542 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 POLR2HP52434 150 aaKnown RBP11.34□□□□□ -0.59
LSM5-201ENST00000223084 DMTNQ08495 405 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 RBBP4Q09028 425 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 GUSBP1Q15486 140 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 ZNF239Q16600 458 aaKnown RBP11.34□□□□□ -0.59
LSM5-201ENST00000223084 SYT14P1Q58G82 188 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 DHRS4L2Q6PKH6 230 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 ZNF550Q7Z398 422 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 PCYOX1LQ8NBM8 494 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 OR8J3Q8NGG0 315 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 ABHD3Q8WU67 409 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 RNASE6Q93091 150 aaKnown RBP11.34□□□□□ -0.59
LSM5-201ENST00000223084 ARL5BQ96KC2 179 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 ZNF607Q96SK3 696 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 WFDC6Q9BQY6 131 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 SPATA5L1Q9BVQ7 753 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 ADAM19Q9H013 955 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 MYLK2Q9H1R3 596 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 OPN3Q9H1Y3 402 aaPredicted RBP11.34□□□□□ -0.59
LSM5-201ENST00000223084 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 TIGARQ9NQ88 270 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 GID8Q9NWU2 228 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 JKAMPQ9P055 326 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 FREM1Q5H8C1 2179 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 ZC3H12DA2A288 527 aaKnown RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 CCT8L1PA6NM43 557 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 M0QX08 132 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 SERPINB7O75635 380 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 MFN2O95140 757 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 PLGP00747 810 aaPredicted RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 NPPAP01160 153 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 CRHP06850 196 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 UQCRBP14927 111 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 PRKAR1BP31321 381 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 PCGF2P35227 344 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 HTR3AP46098 478 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 PCBP3P57721 371 aaKnown RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 RAC3P60763 192 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 COPZ1P61923 177 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 BNIP2Q12982 314 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 ZSWIM7Q19AV6 140 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 FBXL19-AS1Q494R0 122 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 WBP2NLQ6ICG8 309 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 TMPPEQ6ZT21 453 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 FCRLAQ7L513 359 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 CALHM3Q86XJ0 350 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 ARMC8Q8IUR7 673 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 DMRTC2Q8IXT2 367 aaPredicted RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 SMYD1Q8NB12 490 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 SLC25A43Q8WUT9 341 aaPredicted RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 CPNE4Q96A23 557 aaPredicted RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 REXO5Q96IC2 774 aaKnown RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 SH3GL1Q99961 368 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 ECSITQ9BQ95 431 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 PACSIN3Q9UKS6 424 aa11.33□□□□□ -0.6
LSM5-201ENST00000223084 SPIN1Q9Y657 262 aaPredicted RBP11.33□□□□□ -0.6
LSM5-201ENST00000223084 SULT2B1O00204 365 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 CGAP01215 116 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 HTR2AP28223 471 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 CPA2P48052 419 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 DIO1P49895 249 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 CTBP2P56545 445 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 MYBPHQ13203 477 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 VMACQ2NL98 169 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 PIGWQ7Z7B1 504 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 MCEMP1Q8IX19 187 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 ZNF610Q8N9Z0 462 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 GPR32P1Q8NGA4 272 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 RNF128Q8TEB7 428 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 C3orf49Q96BT1 292 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 GMPPAQ96IJ6 420 aaPredicted RBP11.32□□□□□ -0.6
LSM5-201ENST00000223084 ZNF583Q96ND8 569 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 CMTM6Q9NX76 183 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
LSM5-201ENST00000223084 ITPR2Q14571 2701 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 PRORSD1PA6NEY8 169 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 A8MXE2 369 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 M0R3H8 397 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 SMAD9O15198 467 aaKnown RBP11.31□□□□□ -0.6
LSM5-201ENST00000223084 ZNF208O43345 1280 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
LSM5-201ENST00000223084 FESP07332 822 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 IMPDH2P12268 514 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 CXCR1P25024 350 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 CPOXP36551 454 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 CRYBA2P53672 197 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 OR2B6P58173 313 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 DUSP7Q16829 419 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 EEF1A1P5Q5VTE0 462 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms