RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MRPL38Q96DV4 380 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 LCORQ96JN0 433 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 TPSD1Q9BZJ3 242 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 KIR3DX1Q9H7L2 352 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 DYNLRB1Q9NP97 96 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 A4GALTQ9NPC4 353 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF226Q9NYT6 803 aa10.03□□□□□ -0.8
ACTN1-216ENST00000556083 CHD2O14647 1828 aaKnown RBP10.02□□□□□ -0.8
ACTN1-216ENST00000556083 A0A0D9SG52 128 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 NOTOA8MTQ0 251 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 GPR39O43194 453 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 UPK1BO75841 260 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 CSF2P04141 144 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 HOXD9P28356 352 aaPredicted RBP10.02□□□□□ -0.8
ACTN1-216ENST00000556083 VEGFCP49767 419 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 NNATQ16517 81 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF684Q5T5D7 378 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 RFPL4BQ6ZWI9 263 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 VTCN1Q7Z7D3 282 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 CLDN22Q8N7P3 220 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 B3GNT7Q8NFL0 401 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 TAAR8Q969N4 342 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 SLAMF9Q96A28 289 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF778Q96MU6 729 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 WDR83Q9BRX9 315 aaKnown RBP10.02□□□□□ -0.8
ACTN1-216ENST00000556083 HCFC2Q9Y5Z7 792 aa10.02□□□□□ -0.8
ACTN1-216ENST00000556083 ARFGEF2Q9Y6D5 1785 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 LILRB5O75023 590 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 ABOP16442 354 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 NCS1P62166 190 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 RPS26P62854 115 aaKnown RBP10.02□□□□□ -0.81
ACTN1-216ENST00000556083 MADCAM1Q13477 382 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 PHC2Q8IXK0 858 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 OR1J4Q8NGS1 313 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 LINC00597Q9H2U6 94 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 OR2S2Q9NQN1 319 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 B3GNT2Q9NY97 397 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 ATG4BQ9Y4P1 393 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 OR6C76A6NM76 312 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 MSL3P1P0C860 447 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 CD79AP11912 226 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 AKR1C4P17516 323 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 CD53P19397 219 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 TRHRP34981 398 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-216ENST00000556083 MLLT10P55197 1068 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 ZNF616Q08AN1 781 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 ILKQ13418 452 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 LAPTM4AQ15012 233 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 OR1Q1Q15612 314 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 OR7A5Q15622 319 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 MLF2Q15773 248 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-216ENST00000556083 AGAP7PQ5VUJ5 663 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 AGAP6Q5VW22 663 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 DPY19L2P2Q6ZN68 376 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 SLC46A3Q7Z3Q1 461 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 GALNT10Q86SR1 603 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 PSMF1Q92530 271 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 NT5C3BQ969T7 300 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 SENP5Q96HI0 755 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-216ENST00000556083 C7orf34Q96L11 122 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 AGAP4Q96P64 663 aa10.02□□□□□ -0.81
ACTN1-216ENST00000556083 NKX3-1Q99801 234 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-216ENST00000556083 TMEM269A0A1B0GVZ9 245 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 TMEM221A6NGB7 291 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 HSBP1L1C9JCN9 74 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 GABRA5P31644 462 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 CCR5P51681 352 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 GRB2P62993 217 aaKnown RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 PIN1Q13526 163 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ATXN7L3Q14CW9 347 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 UGT8Q16880 541 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 GTF2H4Q92759 462 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ZNF566Q969W8 418 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ELSPBP1Q96BH3 223 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 MOCOSQ96EN8 888 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 TXN2Q99757 166 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ZBP1Q9H171 429 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 LIN7BQ9HAP6 207 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ATP13A2Q9NQ11 1180 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 LUZP4Q9P127 313 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 NDRG4Q9ULP0 352 aaKnown RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 MRPS2Q9Y399 296 aaKnown RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 TRBV11-1A0A0K0K1C0 115 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 SERINC4A6NH21 518 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 FANCGO15287 622 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ABLIM3O94929 683 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 CTXN2P0C2S0 81 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 IL2RGP31785 369 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 KIR2DL3P43628 341 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 BMXP51813 675 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ZNF133P52736 654 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 GK2Q14410 553 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 ZNF791Q3KP31 576 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-216ENST00000556083 NXNL2Q5VZ03 156 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
ACTN1-216ENST00000556083 CORO2AQ92828 525 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms