RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PRSS27Q9BQR3 290 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
RNF4-222ENST00000541204 MED28Q9H204 178 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 IL21RQ9HBE5 538 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 FAM60AQ9NP50 221 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 KLHL1Q9NR64 748 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 NUDT15Q9NV35 164 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 CACNG2Q9Y698 323 aa11.57□□□□□ -0.56
RNF4-222ENST00000541204 OR2W5A6NFC9 320 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 URADA6NGE7 173 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 PRAMEF26H0Y7S4 382 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SPTBP11277 2137 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 HK1P19367 917 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 RBMS1P29558 406 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 ZNF136P52737 540 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 BTG1P62324 171 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 YPEL5P62699 121 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 GALEQ14376 348 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 CEBPEQ15744 281 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 NTRK2Q16620 822 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SLC25A35Q3KQZ1 300 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 CEACAM19Q7Z692 300 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ELMOD2Q8IZ81 293 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 CSNK1A1LQ8N752 337 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 C17orf47Q8NEP4 570 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 HSD17B8Q92506 261 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 KISS1RQ969F8 398 aaPredicted RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 OR51V1Q9H2C8 321 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 MTHFD2LQ9H903 347 aaPredicted RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 FOLH1BQ9HBA9 442 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SIDT1Q9NXL6 827 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 SLC22A7Q9Y694 548 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 BHLHE40O14503 412 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 TNFSF14O43557 240 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 RDH16O75452 317 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 CRYZL1O95825 349 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 CLUP10909 449 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 F8A1P23610 371 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 UQCRC1P31930 480 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 RABIFP47224 123 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ARFIP1P53367 373 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 HHEXQ03014 270 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 FZD2Q14332 565 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 GHDCQ8N2G8 530 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 FAM109AQ8N4B1 249 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 C7orf57Q8NEG2 295 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 OR11H7Q8NGC8 314 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 OR8H1Q8NGG4 311 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 BAHD1Q8TBE0 780 aaPredicted RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 TRMT10AQ8TBZ6 339 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 PTP4A1Q93096 173 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 CD180Q99467 661 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 GSDMCQ9BYG8 508 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 KRCC1Q9NPI7 259 aaPredicted RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 ZNF222Q9UK12 451 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 A0A1W2PQ72 361 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SLC9B1P1A6NJY1 282 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 DUXAA6NLW8 204 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 PEX12O00623 359 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 NOS1APO75052 506 aaPredicted RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 FZD7O75084 574 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SMIM10L1P0DMW3 83 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ST6GAL1P15907 406 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 BMP7P18075 431 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 NPR2P20594 1047 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 MAOBP27338 520 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 HTR2AP28223 471 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ACVR1BP36896 505 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 MAPK14Q16539 360 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 OR9A4Q8NGU2 314 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ABHD4Q8TB40 342 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 BRIX1Q8TDN6 353 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 GPBAR1Q8TDU6 330 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 SMIM10Q96HG1 83 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 AHCYL2Q96HN2 611 aaKnown RBP11.56□□□□□ -0.56
RNF4-222ENST00000541204 HS6ST2Q96MM7 605 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 ZMIZ1Q9ULJ6 1067 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 MTCH2Q9Y6C9 303 aa11.56□□□□□ -0.56
RNF4-222ENST00000541204 J3QLW9 94 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 DHFRP00374 187 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 CT62P0C5K7 136 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 ZNF19P17023 458 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 POU3F3P20264 500 aaPredicted RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 MAZP56270 477 aaKnown RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 EEF1A1P68104 462 aaKnown RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 LYPD4Q6UWN0 246 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 THSD4Q6ZMP0 1018 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 OR2L13Q8N349 312 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 LRRC17Q8N6Y2 441 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 AVL9Q8NBF6 648 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 OR13C5Q8NGS8 318 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 C4orf36Q96KX1 117 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 TEAD3Q99594 435 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 NDC1Q9BTX1 674 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 PIGUQ9H490 435 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 CACYBPQ9HB71 228 aaKnown RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 FBXL4Q9UKA2 621 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms