RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MUC15Q8N387 334 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 C7orf57Q8NEG2 295 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 OR7G3Q8NG95 312 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 OR7G1Q8NGA0 311 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 OR10D3Q8NH80 312 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 ABHD3Q8WU67 409 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 CMTM7Q96FZ5 175 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 PDLIM5Q96HC4 596 aaKnown RBP5.54□□□□□ -1.52
VPS13B-211ENST00000522802 SNX22Q96L94 193 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 NPAS1Q99742 590 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 PIMREGQ9BSJ6 248 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 PRRG4Q9BZD6 226 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 BPESC1Q9GZL8 116 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 DSN1Q9H410 356 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 METTL17Q9H7H0 456 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-211ENST00000522802 ANKRA2Q9H9E1 313 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 PLAC1Q9HBJ0 212 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 NGBQ9NPG2 151 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 MAT2BQ9NZL9 334 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 FLRT3Q9NZU0 649 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 BCAP29Q9UHQ4 241 aa5.54□□□□□ -1.52
VPS13B-211ENST00000522802 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CCDC151A5D8V7 595 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TO15178 435 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 SMAD9O15198 467 aaKnown RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CXCL13O43927 109 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TSPAN2O60636 221 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 REM1O75628 298 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 LYZL6O75951 148 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CLDN9O95484 217 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ADAP00813 363 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 OPN1LWP04000 364 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FESP07332 822 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TUBBP07437 444 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 MLNP12872 115 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CPMP14384 443 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF23P17027 643 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 EDNRAP25101 427 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PIK3R1P27986 724 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 BSGP35613 385 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 EMDP50402 254 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 IRF8Q02556 426 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 LGALS3BPQ08380 585 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 SLC29A2Q14542 456 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PPA1Q15181 289 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TGFBIQ15582 683 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TBCCQ15814 346 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CARTPTQ16568 116 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CCNG2Q16589 344 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TMEM44Q2T9K0 475 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PRICKLE4Q2TBC4 344 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PAGE2BQ5JRK9 111 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 LGSNQ5TDP6 509 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 C6orf163Q5TEZ5 329 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FAM45BPQ6NSW5 357 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FAM180BQ6P0A1 224 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 MED27Q6P2C8 311 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 NPSR1Q6W5P4 371 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 RAD9BQ6WBX8 426 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 NUFIP2Q7Z417 695 aaKnown RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 MAVSQ7Z434 540 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 GALNT10Q86SR1 603 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ADAMTSL2Q86TH1 951 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 SLC15A3Q8IY34 581 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CCDC170Q8IYT3 715 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 SPATA6LQ8N4H0 392 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 LRRC17Q8N6Y2 441 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CEP112Q8N8E3 955 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 GBP7Q8N8V2 638 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 OR52R1Q8NGF1 315 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 HUS1BQ8NHY5 278 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FAM45AQ8TCE6 357 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ACTRT2Q8TDY3 377 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FAM216AQ8WUB2 273 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 HSD17B8Q92506 261 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ANKRD7Q92527 254 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 EFHD2Q96C19 240 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TMCO6Q96DC7 493 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ADGRG7Q96K78 797 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PBKQ96KB5 322 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FOXN4Q96NZ1 517 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 BTBD9Q96Q07 612 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 MTERF1Q99551 399 aaKnown RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 DHRS9Q9BPW9 319 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TRIM5Q9C035 493 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 TMEM185BQ9H7F4 350 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 XAB2Q9HCS7 855 aaKnown RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 FANCFQ9NPI8 374 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 LYARQ9NX58 379 aaKnown RBP5.53□□□□□ -1.52
VPS13B-211ENST00000522802 MED11Q9P086 117 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF639Q9UID6 485 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 SNX8Q9Y5X2 465 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 PSAT1Q9Y617 370 aa5.53□□□□□ -1.52
VPS13B-211ENST00000522802 GOLGA8QA0A0J9YX86 632 aa5.52□□□□□ -1.53
VPS13B-211ENST00000522802 MAGEB16A2A368 324 aa5.52□□□□□ -1.53
VPS13B-211ENST00000522802 GOLGA8OA6NCC3 632 aa5.52□□□□□ -1.53
VPS13B-211ENST00000522802 ZAR1LA6NP61 321 aa5.52□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF814B7Z6K7 855 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms