RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SPATA19Q7Z5L4 167 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 MRGPRGQ86SM5 289 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GALNT10Q86SR1 603 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 MCEMP1Q8IX19 187 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TIGD4Q8IY51 512 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 LILRB2Q8N423 598 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 RPRMLQ8N4K4 120 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 C1orf52Q8N6N3 182 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 CDYL2Q8N8U2 506 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 SUN3Q8TAQ9 357 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TEX47Q8TBZ9 253 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 AGR3Q8TD06 166 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 EXT2Q93063 718 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GAL3ST3Q96A11 431 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TMEM125Q96AQ2 219 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 SGK3Q96BR1 496 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 RNF145Q96MT1 663 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 CCDC115Q96NT0 180 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GPR22Q99680 433 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 LDAHQ9H6V9 325 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TRIM45Q9H8W5 580 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 PRDM7Q9NQW5 492 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 PNO1Q9NRX1 252 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DNAJC11Q9NVH1 559 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 LYARQ9NX58 379 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 KCMF1Q9P0J7 381 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GMPR2Q9P2T1 348 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4Q9UBX2 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 UBQLN2Q9UHD9 624 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 NUFIP1Q9UHK0 495 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 LEF1Q9UJU2 399 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ADAM30Q9UKF2 790 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TBC1D24Q9ULP9 559 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 HSPB11Q9Y547 144 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 PQLC2LA1A4F0 135 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 PTGES3LE9PB15 166 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 G3V3Y1 287 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SAP18O00422 153 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 NR5A2O00482 541 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 GNGT2O14610 69 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MYL12BO14950 172 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ORC5O43913 435 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 PRKRAO75569 313 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MT-ND2P03891 347 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SLC35E2BP0CK96 405 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CD46P15529 392 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MYL12AP19105 171 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 GPX3P22352 226 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CCT3P49368 545 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CENPAP49450 140 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MEOX1P50221 254 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ARHGDIAP52565 204 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 LIM2P55344 173 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 RAB38P57729 211 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 KRTAP10-9P60411 292 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 LSM3P62310 102 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CD83Q01151 205 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 POU4F1Q01851 419 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 LIPEQ05469 1076 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 NFYCQ13952 458 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF273Q14593 569 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CTU2Q2VPK5 515 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 Q3ZCU0 254 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 NXNL2Q5VZ03 156 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 TMEM81Q6P7N7 255 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 TEX261Q6UWH6 196 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 TMPRSS11AQ6ZMR5 421 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 DGAT2L6Q6ZPD8 337 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 OVCH2Q7RTZ1 564 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SLC46A3Q7Z3Q1 461 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 DOLPP1Q86YN1 238 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 GPSM1Q86YR5 675 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SULF2Q8IWU5 870 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ARMC10Q8N2F6 343 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 GHDCQ8N2G8 530 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 UBE2J2Q8N2K1 259 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SLC5A8Q8N695 610 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 YIPF7Q8N8F6 280 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 B3GNT7Q8NFL0 401 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 OR8K3Q8NH51 312 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 PTPMT1Q8WUK0 201 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ST8SIA4Q92187 359 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 RBPMSQ93062 196 aaKnown RBP7.5□□□□□ -1.21
HDAC6-234ENST00000493923 UCN3Q969E3 161 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MARC2Q969Z3 335 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 WDR34Q96EX3 536 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ATOH8Q96SQ7 321 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 MAPKAP1Q9BPZ7 522 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 WACQ9BTA9 647 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CDADC1Q9BWV3 514 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 DEFB126Q9BYW3 111 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SLC19A3Q9BZV2 496 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 PIGUQ9H490 435 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ALG9Q9H6U8 611 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 FOLH1BQ9HBA9 442 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 POPDC3Q9HBV1 291 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SMURF1Q9HCE7 757 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms