RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TTYH2Q9BSA4 534 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF426Q9BUY5 554 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 LRRC61Q9BV99 259 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 ZC3H12DA2A288 527 aaKnown RBP24.06■■□□□ 1.44
HLA-C-208ENST00000487245 SLC9B1P1A6NJY1 282 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 FAM25AB3EWG3 89 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 FAM25CB3EWG5 89 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 FAM25GB3EWG6 89 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 SBK2P0C263 348 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 CHRNB1P11230 501 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 PTNP21246 168 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 THBS2P35442 1172 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 ACTC1P68032 377 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 ACTA1P68133 377 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 PSG6Q00889 435 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 POU4F2Q12837 409 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 OR10H4Q8NGA5 316 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 OR6C4Q8NGE1 309 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 UBASH3BQ8TF42 649 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF578Q96N58 590 aaPredicted RBP24.06■■□□□ 1.44
HLA-C-208ENST00000487245 ADGRL4Q9HBW9 690 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 MEPEQ9NQ76 525 aaPredicted RBP24.06■■□□□ 1.44
HLA-C-208ENST00000487245 EXTL2Q9UBQ6 330 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 ALG5Q9Y673 324 aa24.06■■□□□ 1.44
HLA-C-208ENST00000487245 TTC36A6NLP5 189 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 CLDN4O14493 209 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 DVL2O14641 736 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 SC5DO75845 299 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 PSKH1P11801 424 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 EMDP50402 254 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 IDNKQ5T6J7 187 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 Q6ZS52 159 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF550Q7Z398 422 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 PXKQ7Z7A4 578 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 ZAR1Q86SH2 424 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 LRFN5Q96NI6 719 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 FYTTD1Q96QD9 318 aaKnown RBP24.05■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF576Q9H609 170 aa24.05■■□□□ 1.44
HLA-C-208ENST00000487245 A0A0A6YYC8 382 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 I3L1I5 382 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 SAGP10523 405 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 HK1P19367 917 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 RBMS1P29558 406 aaKnown RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 FAM53BQ14153 422 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 GAS6Q14393 721 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ELOCQ15369 112 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF141Q15928 474 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 KLHL12Q53G59 568 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 UBE2J2Q8N2K1 259 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 LSMEM1Q8N8F7 131 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ORAI3Q9BRQ5 295 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 PRTFDC1Q9NRG1 225 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 MTCH2Q9Y6C9 303 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 A0A1B0GWA3 101 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 CHURC1-FNTBB4DL54 471 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ORC5O43913 435 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF217O75362 1048 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF3P17036 446 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 FASLGP48023 281 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 INPP1P49441 399 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF85Q03923 595 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 MADCAM1Q13477 382 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 YIF1BQ5BJH7 314 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 HACD4Q5VWC8 232 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 VASH1Q7L8A9 365 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 CMIPQ8IY22 773 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 OR4C6Q8NH72 309 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 VSTM2LQ96N03 204 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 TMEM246Q9BRR3 403 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 G6PC3Q9BUM1 346 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 NIPAL2Q9H841 368 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 CAPN10Q9HC96 672 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 DNAJB12Q9NXW2 375 aaKnown RBP24.04■■□□□ 1.44
HLA-C-208ENST00000487245 ZMIZ1Q9ULJ6 1067 aa24.04■■□□□ 1.44
HLA-C-208ENST00000487245 REM1O75628 298 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 NSA2O95478 260 aaKnown RBP24.03■■□□□ 1.44
HLA-C-208ENST00000487245 IL9P15248 144 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 NPR2P20594 1047 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 SHC1P29353 583 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 ERP29P30040 261 aaKnown RBP24.03■■□□□ 1.44
HLA-C-208ENST00000487245 BTG1P62324 171 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 OAFQ86UD1 273 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 ABHD4Q8TB40 342 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 CREB3L1Q96BA8 519 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 DGAT2Q96PD7 388 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 GAS2L1Q99501 681 aaPredicted RBP24.03■■□□□ 1.44
HLA-C-208ENST00000487245 TBX5Q99593 518 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 ENAMQ9NRM1 1142 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 PAQR5Q9NXK6 330 aaPredicted RBP24.03■■□□□ 1.44
HLA-C-208ENST00000487245 HCN3Q9P1Z3 774 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 NLKQ9UBE8 527 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 SERTAD3Q9UJW9 196 aa24.03■■□□□ 1.44
HLA-C-208ENST00000487245 FOXS1O43638 330 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 PRAMEF2O60811 474 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 PROS1P07225 676 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 PEPDP12955 493 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 SLC6A6P31641 620 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ACAA2P42765 397 aaKnown RBP24.02■■□□□ 1.44
HLA-C-208ENST00000487245 MAZP56270 477 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms