RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SLC37A2Q8TED4 501 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 TRMT61AQ96FX7 289 aaKnown RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 TCTN2Q96GX1 697 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 FRMD6Q96NE9 622 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 OR2B2Q9GZK3 357 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 HOXD1Q9GZZ0 328 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 C6orf106Q9H6K1 298 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 FOLH1BQ9HBA9 442 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 TIGARQ9NQ88 270 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 SLC2A4RGQ9NR83 387 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 PRTFDC1Q9NRG1 225 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 CLEC1BQ9P126 229 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 USP36Q9P275 1121 aaKnown RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 RABL2AQ9UBK7 228 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 PLEKHB1Q9UF11 243 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 EPHA6Q9UF33 1036 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 ZNF223Q9UK11 482 aaPredicted RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 RABL2BQ9UNT1 228 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 NTNG1Q9Y2I2 539 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 SF3B6Q9Y3B4 125 aaKnown RBP7.38□□□□□ -1.23
SMC4-212ENST00000470240 CHST2Q9Y4C5 530 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 NOX1Q9Y5S8 564 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 SCN3AQ9NY46 2000 aa7.38□□□□□ -1.23
SMC4-212ENST00000470240 ATG2BQ96BY7 2078 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 A0A0B4J2E0 115 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 A0A1B0GWA3 101 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 A0A1B0GX12 115 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SYNDIG1LA6NDD5 238 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 TMEM221A6NGB7 291 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CENPXA8MT69 81 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 METTL12A8MUP2 240 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 H3BQ06 376 aaPredicted RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 SGK494L7N484 410 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 GTPBP1O00178 669 aaKnown RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 RFXAPO00287 272 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 PEX12O00623 359 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 BHLHE40O14503 412 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SOCS6O14544 535 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CDC42EP2O14613 210 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ZNF749O43361 778 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ORC5O43913 435 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CTNSO60931 367 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ZNF217O75362 1048 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ARL6IP5O75915 188 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 NDUFB2O95178 105 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CSTAP01040 98 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 IGLV3-19P01714 112 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CLEC2LP0C7M8 214 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 PEPDP12955 493 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SPNP16150 400 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HTR2AP28223 471 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 GRK6P43250 576 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 GBX2P52951 348 aaPredicted RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 ATP12AP54707 1039 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 RAB25P57735 213 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SELENBP1Q13228 472 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ELOCQ15369 112 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ZNF141Q15928 474 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 TCTE1Q5JU00 501 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SLC35F1Q5T1Q4 408 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HBMQ6B0K9 141 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CNIH2Q6PI25 160 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ARL9Q6T311 187 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 BAIAP2L2Q6UXY1 529 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 DGLUCYQ7Z3D6 616 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 NRARPQ7Z6K4 114 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 LRRC28Q86X40 367 aaPredicted RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 MCATQ8IVS2 390 aaKnown RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 SLITRK4Q8IW52 837 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 UBQLNLQ8IYU4 475 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CADM2Q8N3J6 435 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 Q8N402 240 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SIRT6Q8N6T7 355 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 ZFP41Q8N8Y5 198 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 FAM98AQ8NCA5 519 aaKnown RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 OR5T3Q8NGG3 340 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 OR5W2Q8NH69 310 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 PFN4Q8NHR9 129 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HAVCR2Q8TDQ0 301 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 TM9SF4Q92544 642 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HOXB13Q92826 284 aaPredicted RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 CTHRC1Q96CG8 243 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 CNN2Q99439 309 aaKnown RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 SDHCQ99643 169 aaPredicted RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 PRSS27Q9BQR3 290 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HDHD5Q9BXW7 423 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SLC19A3Q9BZV2 496 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HDHD2Q9H0R4 259 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 MIR1-1HGQ9H1L0 117 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 OR51V1Q9H2C8 321 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 SYNPO2LQ9H987 977 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 UCK1Q9HA47 277 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 IL21RQ9HBE5 538 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 RPRD1BQ9NQG5 326 aaKnown RBP7.37□□□□□ -1.23
SMC4-212ENST00000470240 SACM1LQ9NTJ5 587 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 QPCTLQ9NXS2 382 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 HAO2Q9NYQ3 351 aa7.37□□□□□ -1.23
SMC4-212ENST00000470240 TBC1D24Q9ULP9 559 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms