RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 C1orf189Q5VU69 101 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 MEPCEQ7L2J0 689 aaKnown RBP17.71■□□□□ 0.42
CHMP6-201ENST00000325167 CPOQ8IVL8 374 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 KLHL36Q8N4N3 616 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 FNDC8Q8TC99 324 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 TMEM43Q9BTV4 400 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 NUDT9Q9BW91 350 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 LAT2Q9GZY6 243 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 TNFRSF10DQ9UBN6 386 aa17.71■□□□□ 0.42
CHMP6-201ENST00000325167 PTPRZ1P23471 2315 aaPredicted RBP17.7■□□□□ 0.42
CHMP6-201ENST00000325167 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
CHMP6-201ENST00000325167 LY6G6EA0A0G2JKS1 128 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 ADAM11O75078 769 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 ONECUT2O95948 504 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 SLC1A3P43003 542 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 CCL7P80098 99 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 PRAMEF17Q5VTA0 474 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 NIPAL3Q6P499 406 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 ZNF574Q6ZN55 896 aaPredicted RBP17.7■□□□□ 0.42
CHMP6-201ENST00000325167 NUP54Q7Z3B4 507 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 PHC2Q8IXK0 858 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 PHOSPHO1Q8TCT1 267 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 UFD1Q92890 307 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 C3orf49Q96BT1 292 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 GAL3ST4Q96RP7 486 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 COQ7Q99807 217 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 CENPOQ9BU64 300 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 NDEL1Q9GZM8 345 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 GAREM1Q9H706 876 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 KLHL21Q9UJP4 597 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 U3KQA8 63 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 FRYLO94915 3013 aa17.7■□□□□ 0.42
CHMP6-201ENST00000325167 FAM186AA6NE01 2351 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 COL5A1P20908 1838 aaPredicted RBP17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ELOA3DA6NLF2 546 aaPredicted RBP17.69■□□□□ 0.42
CHMP6-201ENST00000325167 REM1O75628 298 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 CFIP05156 583 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 SKP2Q13309 424 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ELOA3BQ3SY89 546 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ANKDD1AQ495B1 522 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 PERM1Q5SV97 790 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 TMPRSS11AQ6ZMR5 421 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ZNF321PQ8N8H1 164 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ELOA3Q8NG57 546 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 WWTR1Q9GZV5 400 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 IL20RAQ9UHF4 553 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ATXN7L1Q9ULK2 861 aaPredicted RBP17.69■□□□□ 0.42
CHMP6-201ENST00000325167 ZNF337Q9Y3M9 751 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 PEX16Q9Y5Y5 336 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 PMF1-BGLAPU3KQ54 211 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 SPTBP11277 2137 aa17.69■□□□□ 0.42
CHMP6-201ENST00000325167 IGHV5-10-1A0A0J9YXX1 117 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 AKAP8O43823 692 aaKnown RBP17.68■□□□□ 0.42
CHMP6-201ENST00000325167 EIF4E2O60573 245 aaKnown RBP17.68■□□□□ 0.42
CHMP6-201ENST00000325167 RFPL3O75679 317 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 NOS3P29474 1203 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 S100A5P33763 92 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 SOX3P41225 446 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 PNLIPRP2P54317 469 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 PRPS1P60891 318 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 BDH1Q02338 343 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 POU4F2Q12837 409 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 ISXQ2M1V0 245 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 PLBD1Q6P4A8 553 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 OR51A7Q8NH64 312 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 STT3BQ8TCJ2 826 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 TP53INP1Q96A56 240 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 OR6C1Q96RD1 312 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 ARHGAP9Q9BRR9 750 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 EXOSC4Q9NPD3 245 aaKnown RBP17.68■□□□□ 0.42
CHMP6-201ENST00000325167 CRNNQ9UBG3 495 aaPredicted RBP17.68■□□□□ 0.42
CHMP6-201ENST00000325167 CAB39Q9Y376 341 aaPredicted RBP17.68■□□□□ 0.42
CHMP6-201ENST00000325167 CACNA1EQ15878 2313 aa17.68■□□□□ 0.42
CHMP6-201ENST00000325167 A0A1W2PQM1 296 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 TAF4O00268 1085 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 SLC30A4O14863 429 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 IDH3BO43837 385 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 GPX5O75715 221 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 OR7A10O76100 309 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 LIMS3P0CW19 117 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 LIMS4P0CW20 117 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 DCDP81605 110 aaKnown RBP17.67■□□□□ 0.42
CHMP6-201ENST00000325167 PLCXD2Q0VAA5 305 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 NKAIN1Q4KMZ8 207 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 THSD4Q6ZMP0 1018 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 DPY19L2P2Q6ZN68 376 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 COX15Q7KZN9 410 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 C9orf40Q8IXQ3 194 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 ACBD7Q8N6N7 88 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 LIPHQ8WWY8 451 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 TNFRSF13CQ96RJ3 184 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 MCCC2Q9HCC0 563 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 HAO2Q9NYQ3 351 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 FBXO4Q9UKT5 387 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 SPIN1Q9Y657 262 aaPredicted RBP17.67■□□□□ 0.42
CHMP6-201ENST00000325167 TRAV27A0A087WT01 109 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 ZNF670-ZNF695F2Z2N8 137 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 TSPAN2O60636 221 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 SCRG1O75711 98 aa17.67■□□□□ 0.42
CHMP6-201ENST00000325167 SLC2A10O95528 541 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms