RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ITCHQ96J02 903 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 SRXN1Q9BYN0 137 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 QRSL1Q9H0R6 528 aaKnown RBP18.14■□□□□ 0.49
CLK3-225ENST00000569063 COQ10BQ9H8M1 238 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 MTHFD2LQ9H903 347 aaPredicted RBP18.14■□□□□ 0.49
CLK3-225ENST00000569063 TCF7L2Q9NQB0 619 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 EXOSC3Q9NQT5 275 aaKnown RBP18.14■□□□□ 0.49
CLK3-225ENST00000569063 ACER3Q9NUN7 267 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 CLEC4AQ9UMR7 237 aa18.14■□□□□ 0.49
CLK3-225ENST00000569063 AKAP9Q99996 3911 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 AGAP5A6NIR3 686 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 C16orf97H3BN30 126 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 BCAS1O75363 584 aaPredicted RBP18.13■□□□□ 0.49
CLK3-225ENST00000569063 KCNJ5P48544 419 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 IDH3AP50213 366 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 RNPS1Q15287 305 aaKnown RBP18.13■□□□□ 0.49
CLK3-225ENST00000569063 C3orf33Q6P1S2 294 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 CMIPQ8IY22 773 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 ATP6V1C2Q8NEY4 427 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 DYDC1Q8WWB3 177 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 ROBO4Q8WZ75 1007 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 REXO5Q96IC2 774 aaKnown RBP18.13■□□□□ 0.49
CLK3-225ENST00000569063 WFIKKN1Q96NZ8 548 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 LIME1Q9H400 295 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 SERINC1Q9NRX5 453 aa18.13■□□□□ 0.49
CLK3-225ENST00000569063 CASKO14936 926 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 POLR3GO15318 223 aaPredicted RBP18.12■□□□□ 0.49
CLK3-225ENST00000569063 ANP32DO95626 131 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 HRGP04196 525 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 NR2F1P10589 423 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 RPS4Y1P22090 263 aaKnown RBP18.12■□□□□ 0.49
CLK3-225ENST00000569063 AGTR1P30556 359 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 SLC7A1P30825 629 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 CCKARP32238 428 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 RAC3P60763 192 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 PPP2R2AP63151 447 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 PLAURQ03405 335 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 FBXW10Q5XX13 1052 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 DNAJC14Q6Y2X3 702 aaPredicted RBP18.12■□□□□ 0.49
CLK3-225ENST00000569063 SPNS3Q6ZMD2 512 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 PLEKHM3Q6ZWE6 761 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 HMGN2P46Q86SG4 172 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 VPS33AQ96AX1 596 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 EBF4Q9BQW3 602 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 CCDC28BQ9BUN5 200 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 TPT1P8Q9HAU6 139 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 GP6Q9HCN6 339 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 INTS9Q9NV88 658 aaKnown RBP18.12■□□□□ 0.49
CLK3-225ENST00000569063 ST6GALNAC2Q9UJ37 374 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 EDARQ9UNE0 448 aa18.12■□□□□ 0.49
CLK3-225ENST00000569063 HEATR5AQ86XA9 2040 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 MPDZO75970 2070 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 CLDN24A6NM45 220 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 APOBEC1P41238 236 aaKnown RBP18.11■□□□□ 0.49
CLK3-225ENST00000569063 IST1P53990 364 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 STX1BP61266 288 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 MERTKQ12866 999 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 MAPK11Q15759 364 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 FCRLAQ7L513 359 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 ARFGAP2Q8N6H7 521 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 ABHD3Q8WU67 409 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 GTF2H4Q92759 462 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 CCDC106Q9BWC9 280 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 KLHL28Q9NXS3 571 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 P2RX2Q9UBL9 471 aa18.11■□□□□ 0.49
CLK3-225ENST00000569063 ANKRD17O75179 2603 aaKnown RBP18.1■□□□□ 0.49
CLK3-225ENST00000569063 UQCRHLA0A096LP55 91 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 A0A1W2PNR3 127 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 ADAM11O75078 769 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 PRKD3O94806 890 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 DBIP07108 87 aaKnown RBP18.1■□□□□ 0.49
CLK3-225ENST00000569063 ETFAP13804 333 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 RYKP34925 604 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 CRATP43155 626 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 AQP5P55064 265 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 GNA13Q14344 377 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 BEND4Q6ZU67 534 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 SLC43A2Q8N370 569 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 ZNF563Q8TA94 476 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 SLC25A43Q8WUT9 341 aaPredicted RBP18.1■□□□□ 0.49
CLK3-225ENST00000569063 CKAP2Q8WWK9 683 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 CNOT9Q92600 299 aaKnown RBP18.1■□□□□ 0.49
CLK3-225ENST00000569063 MED18Q9BUE0 208 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 PLEKHF2Q9H8W4 249 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 THUMPD1Q9NXG2 353 aaKnown RBP18.1■□□□□ 0.49
CLK3-225ENST00000569063 ZNF226Q9NYT6 803 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 CALML5Q9NZT1 146 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 KLHL13Q9P2N7 655 aa18.1■□□□□ 0.49
CLK3-225ENST00000569063 DSPPQ9NZW4 1301 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 TFPTP0C1Z6 253 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 IL7RP16871 459 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 ENPP1P22413 925 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 FKBP2P26885 142 aaKnown RBP18.09■□□□□ 0.49
CLK3-225ENST00000569063 IRX1P78414 480 aaPredicted RBP18.09■□□□□ 0.49
CLK3-225ENST00000569063 EXOC3L2Q2M3D2 409 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 TMEM201Q5SNT2 666 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 C6orf10Q5SRN2 563 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 GRINAQ7Z429 371 aa18.09■□□□□ 0.49
CLK3-225ENST00000569063 STK32CQ86UX6 486 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms