RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 SLC38A1Q9H2H9 487 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 TCF7L2Q9NQB0 619 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC6A13Q9NSD5 602 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 TMEM45AQ9NWC5 275 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 PRDM4Q9UKN5 801 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 PLCE1Q9P212 2302 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 AGAP5A6NIR3 686 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CYP7B1O75881 506 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 PLGP00747 810 aaPredicted RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 UBTFL6P0CB48 400 aaPredicted RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 RPS4Y1P22090 263 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 FKBP2P26885 142 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 DNAJA1P31689 397 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 UGT2B10P36537 528 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 IDH3AP50213 366 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CCR4P51679 360 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CTBP2P56545 445 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 RAC3P60763 192 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 PPP2R2AP63151 447 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CHRNEQ04844 493 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 RNPS1Q15287 305 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 SYPL1Q16563 259 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 COX20Q5RI15 118 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 C3orf33Q6P1S2 294 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC43A2Q8N370 569 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 ANKFN1Q8N957 763 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 OR9I1Q8NGQ6 314 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 STON2Q8WXE9 905 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 GTF2H4Q92759 462 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 NINJ1Q92982 152 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 REXO5Q96IC2 774 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 CCDC28BQ9BUN5 200 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 TPT1P8Q9HAU6 139 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 ACER3Q9NUN7 267 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 INTS9Q9NV88 658 aaKnown RBP11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
LPCAT4-206ENST00000566581 ALPK2Q86TB3 2170 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 CASKO14936 926 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 BCAS1O75363 584 aaPredicted RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 ANP32DO95626 131 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 CHRM4P08173 479 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 NR2F1P10589 423 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 POU2F1P14859 743 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC7A1P30825 629 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 CPOXP36551 454 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 ARFGAP2Q8N6H7 521 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC25A43Q8WUT9 341 aaPredicted RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 CKAP2Q8WWK9 683 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 ROBO4Q8WZ75 1007 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 VPS33AQ96AX1 596 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 SERINC1Q9NRX5 453 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 THUMPD1Q9NXG2 353 aaKnown RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 CALML5Q9NZT1 146 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 ITGB1BP2Q9UKP3 347 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 TESMINQ9Y4I5 508 aa11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
LPCAT4-206ENST00000566581 FAAHO00519 579 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 PRKD3O94806 890 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 HRGP04196 525 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 DBIP07108 87 aaKnown RBP11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 IL7RP16871 459 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 AGTR1P30556 359 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 KCNJ5P48544 419 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 CLK1P49759 484 aaKnown RBP11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 STX1BP61266 288 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 PLAURQ03405 335 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 MERTKQ12866 999 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 GNA13Q14344 377 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 MAPK11Q15759 364 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 BEND4Q6ZU67 534 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 PLEKHM3Q6ZWE6 761 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 STK32CQ86UX6 486 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 FUNDC1Q8IVP5 155 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 ATP6V1C2Q8NEY4 427 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 PNPT1Q8TCS8 783 aaKnown RBP11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 NRGNQ92686 78 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 MAGEB18Q96M61 343 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 WFIKKN1Q96NZ8 548 aa11.28□□□□□ -0.6
LPCAT4-206ENST00000566581 EBF4Q9BQW3 602 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms