RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 HMGB4Q8WW32 186 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 ZFPM2Q8WW38 1151 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 XAGE5Q8WWM1 108 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 OR5P2Q8WZ92 322 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 FAM83CQ9BQN1 747 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 YIPF4Q9BSR8 244 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 JAM3Q9BX67 310 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 SLC6A20Q9NP91 592 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 HINT3Q9NQE9 182 aaKnown RBP12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 SLC39A1Q9NY26 324 aa12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 NFKBIL1Q9UBC1 381 aaPredicted RBP12.71□□□□□ -0.38
AC040174.1-201ENST00000563003 PLXNA2O75051 1894 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 NPC1O15118 1278 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 CPN1P15169 458 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 RAB3BP20337 219 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PREPP48147 710 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PDGFRLQ15198 375 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 GAB4Q2WGN9 574 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 FAM69AQ5T7M9 428 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 ZNF660Q6AZW8 331 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 FAM83HQ6ZRV2 1179 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 Q6ZVL8 140 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 SYT9Q86SS6 491 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 CPOQ8IVL8 374 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 KLHDC8AQ8IYD2 350 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 KAT2AQ92830 837 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 GCDHQ92947 438 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 NXPE3Q969Y0 559 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 C5AR2Q9P296 337 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 MLXQ9UH92 298 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 SLC6A5Q9Y345 797 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 ZC3H12DA2A288 527 aaKnown RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PRRT4C9JH25 899 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PRNPP04156 253 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 NR2F1P10589 423 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 BUD31P41223 144 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PXKQ7Z7A4 578 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 TRAM1L1Q8N609 369 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 TMEM99Q8N816 258 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 SCAMP4Q969E2 229 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 KCNK7Q9Y2U2 307 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 NPFFR2Q9Y5X5 522 aa12.7□□□□□ -0.38
AC040174.1-201ENST00000563003 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 CATP04040 527 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 NPPBP16860 134 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 ANXA7P20073 488 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 IFNGR2P38484 337 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 PNLIPRP1P54315 467 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 ERVK-25P63136 954 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 LTB4RQ15722 352 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 HENMT1Q5T8I9 393 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 ZNF740Q8NDX6 193 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 SMPDL3AQ92484 453 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 NKX2-4Q9H2Z4 354 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 NOX3Q9HBY0 568 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 MED11Q9P086 117 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 P2RX2Q9UBL9 471 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 A0A1W2PPK0 400 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 CTDSPLO15194 276 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 PLPP2O43688 288 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 SERPIND1P05546 499 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 AHRP35869 848 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 OMPP47874 163 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 MESP2Q0VG99 397 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 UBXN2BQ14CS0 331 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 POM121L1PQ3SYA9 428 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 FNDC3BQ53EP0 1204 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 SZRD1Q7Z422 152 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 GANCQ8TET4 914 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 OSTF1Q92882 214 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 ANKRD19PQ9H560 264 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 IGFLR1Q9H665 355 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 CYB5R1Q9UHQ9 305 aa12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
AC040174.1-201ENST00000563003 FXYD6-FXYD2A0A087WZ82 144 aa12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 EDDM13A0A1B0GTR0 161 aa12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 HMSDA8MTL9 139 aa12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 KPNA3O00505 521 aaPredicted RBP12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 CREBL2O60519 120 aaPredicted RBP12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 SC5DO75845 299 aa12.68□□□□□ -0.38
AC040174.1-201ENST00000563003 IGF2P01344 180 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms