RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.14□□□□□ -0.15
DDX54-205ENST00000548786 MYO9AB2RTY4 2548 aa14.14□□□□□ -0.15
DDX54-205ENST00000548786 NTN1O95631 604 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 GUSBP08236 651 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 VIMP08670 466 aaKnown RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 IL7RP16871 459 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 HOXB9P17482 250 aaPredicted RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 CCNA2P20248 432 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 ADH6P28332 368 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 SLC7A1P30825 629 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 KCNJ5P48544 419 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 ATP4BP51164 291 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 TXNL4AP83876 142 aaKnown RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 SELENBP1Q13228 472 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 RGNQ15493 299 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 EXOC3L2Q2M3D2 409 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 FBXL19-AS1Q494R0 122 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 MRPL2Q5T653 305 aaKnown RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 ZNF836Q6ZNA1 936 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 OR5B2Q96R09 309 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 PIGMQ9H3S5 423 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 COQ10BQ9H8M1 238 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 MTHFD2LQ9H903 347 aaPredicted RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 MCCC2Q9HCC0 563 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 SLC52A3Q9NQ40 469 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 RLIMQ9NVW2 624 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 DNAJB12Q9NXW2 375 aaKnown RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 KCNN3Q9UGI6 736 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 TRIM33Q9UPN9 1127 aa14.13□□□□□ -0.15
DDX54-205ENST00000548786 HRNRQ86YZ3 2850 aaPredicted RBP14.13□□□□□ -0.15
DDX54-205ENST00000548786 TMEM247A6NEH6 219 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 TUBAL3A6NHL2 446 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 GJE1A6NN92 205 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 A8MXE2 369 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 DBIP07108 87 aaKnown RBP14.12□□□□□ -0.15
DDX54-205ENST00000548786 TFPTP0C1Z6 253 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 TFPIP10646 304 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 KLK2P20151 261 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 IDH2P48735 452 aaKnown RBP14.12□□□□□ -0.15
DDX54-205ENST00000548786 CRISP3P54108 245 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 CTBP2P56545 445 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 ZNF239Q16600 458 aaKnown RBP14.12□□□□□ -0.15
DDX54-205ENST00000548786 SLC25A53Q5H9E4 307 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 PLEKHM3Q6ZWE6 761 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 PEX5LQ8IYB4 626 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 C10orf111Q8N326 155 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 OR52P1PQ8NH57 321 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 ABHD3Q8WU67 409 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 TMEM234Q8WY98 164 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 ST8SIA1Q92185 356 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
DDX54-205ENST00000548786 GPATCH1Q9BRR8 931 aaKnown RBP14.12□□□□□ -0.15
DDX54-205ENST00000548786 C12orf49Q9H741 205 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 CTPS2Q9NRF8 586 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 ACER3Q9NUN7 267 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 VAPAQ9P0L0 249 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 PROCRQ9UNN8 238 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 EMC9Q9Y3B6 208 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 CREBBPQ92793 2442 aa14.12□□□□□ -0.15
DDX54-205ENST00000548786 C5orf58C9J3I9 102 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 CRHP06850 196 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 GKN3PP0CG01 181 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 TROVE2P10155 538 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX54-205ENST00000548786 NID1P14543 1247 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 RPS4Y1P22090 263 aaKnown RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 FAM27E3Q08E93 113 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 GNA13Q14344 377 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 LRIF1Q5T3J3 769 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 CGB2Q6NT52 195 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 C3orf33Q6P1S2 294 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 ZNF474Q6S9Z5 364 aaPredicted RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 FAM214BQ7L5A3 538 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 KIF18BQ86Y91 864 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 ZNF610Q8N9Z0 462 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 NFKBIDQ8NI38 313 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 NRGNQ92686 78 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 OR11A1Q9GZK7 315 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 RAD21L1Q9H4I0 556 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 RABEP2Q9H5N1 569 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 IKZF5Q9H5V7 419 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 ZNF385DQ9H6B1 395 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 TIGARQ9NQ88 270 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 SERINC1Q9NRX5 453 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 PAQR5Q9NXK6 330 aaPredicted RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 CALML5Q9NZT1 146 aa14.11□□□□□ -0.15
DDX54-205ENST00000548786 FOXD3Q9UJU5 478 aaPredicted RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 ZNF443Q9Y2A4 671 aaPredicted RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 ANKRD17O75179 2603 aaKnown RBP14.11□□□□□ -0.15
DDX54-205ENST00000548786 A0A1W2PP18 115 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
DDX54-205ENST00000548786 MSTNO14793 375 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 ANGPT2O15123 496 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 DNAJA2O60884 412 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 ENPP1P22413 925 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 GUSBP1Q15486 140 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 LIN52Q52LA3 116 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 GCNT6Q5T4J0 391 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 CMIPQ8IY22 773 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 CLIP4Q8N3C7 705 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms