RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CD79BP40259 229 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 IDH2P48735 452 aaKnown RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 DSTNP60981 165 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 SELENBP1Q13228 472 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 DAZAP2Q15038 168 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 GUSBP1Q15486 140 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 RPS26P11Q5JNZ5 115 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 AP1ARQ63HQ0 302 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 ANKRD34AQ69YU3 496 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 PLEKHM3Q6ZWE6 761 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 VRK2Q86Y07 508 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 CDC20BQ86Y33 519 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 ABHD3Q8WU67 409 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 TMEM234Q8WY98 164 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 GTF2H4Q92759 462 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 REXO5Q96IC2 774 aaKnown RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 WFIKKN1Q96NZ8 548 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 OR5B2Q96R09 309 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 KLHL4Q9C0H6 718 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 PAIP1Q9H074 479 aaKnown RBP10.32□□□□□ -0.76
CDHR3-205ENST00000468143 C12orf49Q9H741 205 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 COQ10BQ9H8M1 238 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 TIGARQ9NQ88 270 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 CTPS2Q9NRF8 586 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 PLSCR4Q9NRQ2 329 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 ACER3Q9NUN7 267 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 KLHL28Q9NXS3 571 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 SLAMF8Q9P0V8 285 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 DCTN4Q9UJW0 460 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 SLC35A3Q9Y2D2 325 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 EMC9Q9Y3B6 208 aa10.32□□□□□ -0.76
CDHR3-205ENST00000468143 FBN2P35556 2912 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 NUP214P35658 2090 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 FAM221AA4D161 298 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 CLIC1O00299 241 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 CASKO14936 926 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 TFPTP0C1Z6 253 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 TFPIP10646 304 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 CD8BP10966 210 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 NCF2P19878 526 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 SLC7A1P30825 629 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 TXNL4AP83876 142 aaKnown RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 SF3A3Q12874 501 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF239Q16600 458 aaKnown RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 AGKQ53H12 422 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 PAGE3Q5JUK9 113 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 GTF2IRD2BQ6EKJ0 949 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 BLOC1S3Q6QNY0 202 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 MSANTD1Q6ZTZ1 278 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF550Q7Z398 422 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 NUFIP2Q7Z417 695 aaKnown RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 GTF2IRD2Q86UP8 949 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 TUSC5Q8IXB3 177 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 FAM71CQ8NEG0 241 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 OR6K3Q8NGY3 331 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 OR52P1PQ8NH57 321 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 SLC38A5Q8WUX1 472 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 WDR60Q8WVS4 1066 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ST8SIA1Q92185 356 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF775Q96BV0 537 aaPredicted RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ZC3HAV1LQ96H79 300 aaKnown RBP10.31□□□□□ -0.76
CDHR3-205ENST00000468143 DACH2Q96NX9 599 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 SLC39A3Q9BRY0 314 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 NPHS2Q9NP85 383 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 SERINC1Q9NRX5 453 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 RLIMQ9NVW2 624 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF446Q9NWS9 450 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 ELOVL5Q9NYP7 299 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 P2RX2Q9UBL9 471 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 NDRG3Q9UGV2 375 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 CRYBG3Q68DQ2 2970 aa10.31□□□□□ -0.76
CDHR3-205ENST00000468143 C16orf97H3BN30 126 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 ETV2O00321 342 aaPredicted RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 EDF1O60869 148 aaKnown RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 PRKD3O94806 890 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 DBIP07108 87 aaKnown RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 GKN3PP0CG01 181 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 NID1P14543 1247 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 AGTR1P30556 359 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 DNAJA1P31689 397 aaKnown RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 UGT2B10P36537 528 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 MRPL19P49406 292 aaKnown RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 RGNQ15493 299 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 MRPL2Q5T653 305 aaKnown RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 C3orf33Q6P1S2 294 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 C22orf34Q6ZV56 151 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 FCRLAQ7L513 359 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 ADGRG3Q86Y34 549 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 PEX5LQ8IYB4 626 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 RNF128Q8TEB7 428 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 OIT3Q8WWZ8 545 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 MAL2Q969L2 176 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 SPDL1Q96EA4 605 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 TMEM19Q96HH6 336 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 CCDC106Q9BWC9 280 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 SLC52A3Q9NQ40 469 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 GLRX2Q9NS18 164 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms