RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 LIME1Q9H400 295 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
COMMD3-202ENST00000444869 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 ITGB1BP2Q9UKP3 347 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
COMMD3-202ENST00000444869 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
COMMD3-202ENST00000444869 AGAP5A6NIR3 686 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 KRT75O95678 551 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 CHRM4P08173 479 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 POU2F1P14859 743 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 PGCP20142 388 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 AGTR1P30556 359 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 SESN3P58005 492 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 HPCAP84074 193 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 MAPK11Q15759 364 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 SYPL1Q16563 259 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 TMEM176BQ3YBM2 270 aaPredicted RBP12.56□□□□□ -0.4
COMMD3-202ENST00000444869 GPAT3Q53EU6 434 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 LRRC74BQ6ZQY2 392 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 CMIPQ8IY22 773 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 MIER2Q8N344 545 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 PMM1Q92871 262 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 QRSL1Q9H0R6 528 aaKnown RBP12.56□□□□□ -0.4
COMMD3-202ENST00000444869 GP6Q9HCN6 339 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 TIGARQ9NQ88 270 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 ACER3Q9NUN7 267 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
COMMD3-202ENST00000444869 PRRC2AP48634 2157 aaKnown RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 A0A1W2PPR1 153 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 CLDN24A6NM45 220 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 HMGB1P1B2RPK0 211 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 ADAM11O75078 769 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 CYP7B1O75881 506 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 PLGP00747 810 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 PABPC4LP0CB38 370 aaKnown RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 HOXB9P17482 250 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 POLR2JP52435 117 aaKnown RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 IST1P53990 364 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 CTBP2P56545 445 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 RAC3P60763 192 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 KCNJ10P78508 379 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 TIGD2Q4W5G0 525 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 GTF2IRD2BQ6EKJ0 949 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 DNAJC14Q6Y2X3 702 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 PLEKHM3Q6ZWE6 761 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 HDXQ7Z353 690 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 GTF2IRD2Q86UP8 949 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 PNPT1Q8TCS8 783 aaKnown RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 TMEM234Q8WY98 164 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 ITCHQ96J02 903 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 CCDC106Q9BWC9 280 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 CXXC4Q9H2H0 198 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 RMND5AQ9H871 391 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
COMMD3-202ENST00000444869 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-202ENST00000444869 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-202ENST00000444869 C16orf97H3BN30 126 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-202ENST00000444869 SIAH2O43255 324 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 CRYGSP22914 178 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 SLC7A1P30825 629 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 IDH3AP50213 366 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 MERTKQ12866 999 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 GTDC1Q4AE62 458 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 PAMR1Q6UXH9 720 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 HMGN2P46Q86SG4 172 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-202ENST00000444869 STON2Q8WXE9 905 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
COMMD3-202ENST00000444869 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 VPS33AQ96AX1 596 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 FOXC2Q99958 501 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 EBF4Q9BQW3 602 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 MTHFD2LQ9H903 347 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-202ENST00000444869 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 KLHL28Q9NXS3 571 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 FREM1Q5H8C1 2179 aa12.54□□□□□ -0.4
COMMD3-202ENST00000444869 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
COMMD3-202ENST00000444869 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
COMMD3-202ENST00000444869 FAAHO00519 579 aa12.53□□□□□ -0.4
COMMD3-202ENST00000444869 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
COMMD3-202ENST00000444869 NR2F1P10589 423 aa12.53□□□□□ -0.4
COMMD3-202ENST00000444869 ETFAP13804 333 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms