RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CMIPQ8IY22 773 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 PEX5LQ8IYB4 626 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 FAM222BQ8WU58 562 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 STON2Q8WXE9 905 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 CNOT9Q92600 299 aaKnown RBP21.52■■□□□ 1.04
CPNE1-217ENST00000439669 REXO5Q96IC2 774 aaKnown RBP21.52■■□□□ 1.04
CPNE1-217ENST00000439669 OPN3Q9H1Y3 402 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-217ENST00000439669 RAD21L1Q9H4I0 556 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 RABEP2Q9H5N1 569 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 EXOSC3Q9NQT5 275 aaKnown RBP21.52■■□□□ 1.04
CPNE1-217ENST00000439669 ACER3Q9NUN7 267 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 PROCRQ9UNN8 238 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 TRIM33Q9UPN9 1127 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 EMC9Q9Y3B6 208 aa21.52■■□□□ 1.04
CPNE1-217ENST00000439669 A0A0G2JND7 137 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 ETV2O00321 342 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 DBIP07108 87 aaKnown RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 RPS4Y1P22090 263 aaKnown RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 ZNF239Q16600 458 aaKnown RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 HSP90B2PQ58FF3 399 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 FAM214BQ7L5A3 538 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 LINC01560Q8TB33 94 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 ROBO4Q8WZ75 1007 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 CPNE4Q96A23 557 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 GMPPAQ96IJ6 420 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 SIKE1Q9BRV8 207 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 SRXN1Q9BYN0 137 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 COQ10BQ9H8M1 238 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 SERINC1Q9NRX5 453 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 TMEM45AQ9NWC5 275 aa21.51■■□□□ 1.03
CPNE1-217ENST00000439669 THUMPD1Q9NXG2 353 aaKnown RBP21.51■■□□□ 1.03
CPNE1-217ENST00000439669 A0A1W2PNR3 127 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 PLAURQ03405 335 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 GUSBP1Q15486 140 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 RGNQ15493 299 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 MAPK11Q15759 364 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 RPS26P11Q5JNZ5 115 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-217ENST00000439669 MRPL2Q5T653 305 aaKnown RBP21.5■■□□□ 1.03
CPNE1-217ENST00000439669 PLEKHM3Q6ZWE6 761 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 SLC38A5Q8WUX1 472 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 PMM1Q92871 262 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 TMEM19Q96HH6 336 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 CACYBPQ9HB71 228 aaKnown RBP21.5■■□□□ 1.03
CPNE1-217ENST00000439669 DNAJB12Q9NXW2 375 aaKnown RBP21.5■■□□□ 1.03
CPNE1-217ENST00000439669 FBN2P35556 2912 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 TEX15Q9BXT5 2789 aa21.5■■□□□ 1.03
CPNE1-217ENST00000439669 TFPTP0C1Z6 253 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 PABPC4LP0CB38 370 aaKnown RBP21.49■■□□□ 1.03
CPNE1-217ENST00000439669 NID1P14543 1247 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 HOXB9P17482 250 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-217ENST00000439669 PAGE3Q5JUK9 113 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 LRIF1Q5T3J3 769 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 GTF2IRD2BQ6EKJ0 949 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 GTF2IRD2Q86UP8 949 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 OR52P1PQ8NH57 321 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 OR5B2Q96R09 309 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 GLRX2Q9NS18 164 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 SLC25A37Q9NYZ2 338 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 SLAMF8Q9P0V8 285 aa21.49■■□□□ 1.03
CPNE1-217ENST00000439669 AP3D1O14617 1153 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 SS18L1O75177 396 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 CGAP01215 116 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 NUDT7P0C024 238 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 CD8BP10966 210 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 CD1EP15812 388 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 KCNJ5P48544 419 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 IDH2P48735 452 aaKnown RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 FADDQ13158 208 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 LIN52Q52LA3 116 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 ZNF474Q6S9Z5 364 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 GRINAQ7Z429 371 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 VRK2Q86Y07 508 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 ZNF610Q8N9Z0 462 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 OR6K3Q8NGY3 331 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 RNF128Q8TEB7 428 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 ABHD3Q8WU67 409 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 GPATCH1Q9BRR8 931 aaKnown RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 SLC52A3Q9NQ40 469 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 CTPS2Q9NRF8 586 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 SPIN1Q9Y657 262 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 DSPPQ9NZW4 1301 aa21.48■■□□□ 1.03
CPNE1-217ENST00000439669 ANKHD1Q8IWZ3 2542 aaKnown RBP21.48■■□□□ 1.03
CPNE1-217ENST00000439669 CREBBPQ92793 2442 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 A0A1W2PP18 115 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 ADAM11O75078 769 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 CTAG2O75638 210 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 TROVE2P10155 538 aaKnown RBP eCLIP21.47■■□□□ 1.03
CPNE1-217ENST00000439669 TFPIP10646 304 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 EPXP11678 715 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 POU2F1P14859 743 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 PPIBP23284 216 aaKnown RBP21.47■■□□□ 1.03
CPNE1-217ENST00000439669 CD79BP40259 229 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 APOBEC1P41238 236 aaKnown RBP21.47■■□□□ 1.03
CPNE1-217ENST00000439669 FAM27E3Q08E93 113 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 SYT14P1Q58G82 188 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 ZNF836Q6ZNA1 936 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 MSRB3Q8IXL7 192 aa21.47■■□□□ 1.03
CPNE1-217ENST00000439669 SLC25A43Q8WUT9 341 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-217ENST00000439669 MAL2Q969L2 176 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms