RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 AQP9O43315 295 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 PRR23D2P0DMB1 279 aaPredicted RBP17.13■□□□□ 0.33
SIL1-202ENST00000394817 ZNF615Q8N8J6 731 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 SLC37A3Q8NCC5 494 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 OR51Q1Q8NH59 317 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 PELOQ9BRX2 385 aaKnown RBP17.13■□□□□ 0.33
SIL1-202ENST00000394817 RAB33BQ9H082 229 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 OR10A5Q9H207 317 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 ASB6Q9NWX5 421 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 EPHA6Q9UF33 1036 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 NUP210LQ5VU65 1888 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 SPAG17Q6Q759 2223 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 CCDC182A6NF36 153 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 RIIAD1A6NNX1 92 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 LMO7DNF2Z398 122 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 DLGAP3O95886 979 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 HLA-DPB1P04440 258 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 CELP19835 753 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 GALP22466 123 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 PGDP52209 483 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 FHL1Q13642 323 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 ZNF79Q15937 498 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 ZNF362Q5T0B9 420 aaPredicted RBP17.13■□□□□ 0.33
SIL1-202ENST00000394817 ULK3Q6PHR2 472 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 OGFOD3Q6PK18 319 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 KIRREL2Q6UWL6 708 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 OAFQ86UD1 273 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 METTL27Q8N6F8 245 aaPredicted RBP17.13■□□□□ 0.33
SIL1-202ENST00000394817 FAM181AQ8N9Y4 354 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 PTP4A1Q93096 173 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 NACC2Q96BF6 587 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 INPP5EQ9NRR6 644 aa17.13■□□□□ 0.33
SIL1-202ENST00000394817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 ZC3H12DA2A288 527 aaKnown RBP17.12■□□□□ 0.33
SIL1-202ENST00000394817 OR2W5A6NFC9 320 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 EFCAB7A8K855 629 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 K7ESF4 209 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 CLPSP04118 112 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 SLC2A5P22732 501 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 HNRNPKP61978 463 aaKnown RBP eCLIP17.12■□□□□ 0.33
SIL1-202ENST00000394817 GPR50Q13585 617 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 SERTAD2Q14140 314 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 NNATQ16517 81 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
SIL1-202ENST00000394817 DEFB133Q30KQ1 61 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 B3GLCTQ6Y288 498 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 SDR16C5Q8N3Y7 309 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 TMEM99Q8N816 258 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 BCORP1Q8N888 145 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 ATP6V1C2Q8NEY4 427 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 OR51A7Q8NH64 312 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 OR4C6Q8NH72 309 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 DNAJA4Q8WW22 397 aaPredicted RBP17.12■□□□□ 0.33
SIL1-202ENST00000394817 AP3S1Q92572 193 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 ALG8Q9BVK2 526 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 MIXL1Q9H2W2 232 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 MCCC2Q9HCC0 563 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 MUTYHQ9UIF7 546 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 POLHQ9Y253 713 aa17.12■□□□□ 0.33
SIL1-202ENST00000394817 GABRPO00591 440 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SPNP16150 400 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 ZNF3P17036 446 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 CD1CP29017 333 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SLC6A6P31641 620 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 EPHA4P54764 986 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 BIKQ13323 160 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 GRM7Q14831 915 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 C14orf28Q4W4Y0 310 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 RTL4Q6ZR62 310 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 KLBQ86Z14 1044 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 CAMKK1Q8N5S9 505 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SETD6Q8TBK2 473 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 DCLRE1CQ96SD1 692 aaKnown RBP17.11■□□□□ 0.33
SIL1-202ENST00000394817 PHOX2BQ99453 314 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 TIMP4Q99727 224 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 TMED9Q9BVK6 235 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SRRQ9GZT4 340 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 ABCB9Q9NP78 766 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 C14orf119Q9NWQ9 140 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 PRODH2Q9UF12 536 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SIT1Q9Y3P8 196 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 OR10H1Q9Y4A9 318 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 SDK1Q7Z5N4 2213 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 PPP1R3DO95685 299 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 IFNA16P05015 189 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 PEPDP12955 493 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 CXCL12P48061 93 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
SIL1-202ENST00000394817 NXPH1P58417 271 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 CRYZQ08257 329 aaKnown RBP17.11■□□□□ 0.33
SIL1-202ENST00000394817 GALEQ14376 348 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
SIL1-202ENST00000394817 KLHL12Q53G59 568 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 DDI2Q5TDH0 399 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 ARHGAP11AQ6P4F7 1023 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 UBALD2Q8IYN6 164 aa17.11■□□□□ 0.33
SIL1-202ENST00000394817 CADM2Q8N3J6 435 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms