RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 EIF2DP41214 584 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NAA10P41227 235 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NR0B1P51843 470 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 SORT1Q99523 831 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 DHRS4Q9BTZ2 278 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 POU2F3Q9UKI9 436 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NAALAD2Q9Y3Q0 740 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NUBP2Q9Y5Y2 271 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 FGF4P08620 206 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 GMPRP36959 345 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 PRKXP51817 358 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR2S2Q9NQN1 319 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 WASF3Q9UPY6 502 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ANHXE9PGG2 379 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 M0R2Z0 102 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF28P17035 718 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 GNRHRP30968 328 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 NR4A2P43354 598 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF547Q8IVP9 402 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 KDM8Q8N371 416 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR7G3Q8NG95 312 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADAMTS19Q8TE59 1207 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 CREB3L4Q8TEY5 395 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 UTP4Q969X6 686 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 MROQ9BYG7 248 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A0G2JMP0 313 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A1B0GVG6 124 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 M0R129 80 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 XCR1P46094 333 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 SFRP4Q6FHJ7 346 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR4M2Q8NGB6 313 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 ARL11Q969Q4 196 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 PKIBQ9C010 78 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 PCED1AQ9H1Q7 454 aa12.5□□□□□ -0.41
RAPGEF1-201ENST00000372189 FMO6PO60774 539 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 RNF212Q495C1 297 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 GSG1LQ6UXU4 331 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 SVBPQ8N300 66 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 SYT14Q8NB59 555 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 AGBL5Q8NDL9 886 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 TCTN2Q96GX1 697 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 MTHFD2LQ9H903 347 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZNF226Q9NYT6 803 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 RPS10-NUDT3A0A1W2PQS6 291 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 BLACEA4D250 179 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 AOAHP28039 575 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 CD34P28906 385 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 RPS10P46783 165 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 GK2Q14410 553 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 C9orf50Q5SZB4 431 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPR137CQ8N3F9 429 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ARNT2Q9HBZ2 717 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 JRKO75564 520 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 KLKB1P03952 638 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 PITPNBP48739 271 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 PTTG1IPP53801 180 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 CNOT9Q92600 299 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 BPIFA2Q96DR5 249 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 INSM2Q96T92 566 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ENPP4Q9Y6X5 453 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 H2BFMP0C1H6 154 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ITGAMP11215 1152 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 WDR53Q7Z5U6 358 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 CLECL1Q8IZS7 167 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ZFP90Q8TF47 636 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 COQ10AQ96MF6 247 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 SMIM14Q96QK8 99 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 LSM5Q9Y4Y9 91 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 TCRBV3S1A0A5B6 114 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 DFFBO76075 338 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADAMTSL4Q6UY14 1074 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 TEX26Q8N6G2 289 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms