RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 SYS1Q8N2H4 156 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 DTX3Q8N9I9 347 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 OR7G2Q8NG99 324 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 OR11H4Q8NGC9 324 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 OR52E1Q8NGJ3 308 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 GHSRQ92847 366 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 PTP4A1Q93096 173 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 SDF2Q99470 211 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 DPCDQ9BVM2 203 aaPredicted RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 NARFLQ9H6Q4 476 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 ZMIZ1Q9ULJ6 1067 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 A0A1W2PS29 197 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 A6NIN4 97 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF879B4DU55 563 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 PDCD5O14737 125 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 OGG1O15527 345 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 OR7A10O76100 309 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 PCDH8O95206 1070 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 TGM6O95932 706 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 AK1P00568 194 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 CEBPBP17676 345 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 CXCL3P19876 107 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 SLC2A5P22732 501 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 PYCR1P32322 319 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ACVR1BP36896 505 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 FXYD6P3P58550 94 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 RPS15AP62244 130 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 NTHL1P78549 312 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 KLF9Q13886 244 aaPredicted RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 SUZ12Q15022 739 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 GPR68Q15743 365 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ST3GAL2Q16842 350 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 METTL11BQ5VVY1 283 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 RTL4Q6ZR62 310 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF671Q8TAW3 534 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF559Q9BR84 538 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 HCAR1Q9BXC0 346 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 TMEM27Q9HBJ8 222 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 SIGLEC7Q9Y286 467 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 MRPS7Q9Y2R9 242 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF593O00488 134 aaPredicted RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 KHNYNO15037 678 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 MRPL3P09001 348 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 NT5EP21589 574 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 NDUFS1P28331 727 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 SLC6A6P31641 620 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 OR12D2P58182 307 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 EXOSC2Q13868 293 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 DUSP5Q16690 384 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 LGALSLQ3ZCW2 172 aaPredicted RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF425Q6IV72 752 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF613Q6PF04 617 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 SIX5Q8N196 739 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 POMGNT2Q8NAT1 580 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 C17orf47Q8NEP4 570 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 PFN4Q8NHR9 129 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ZFPM2Q8WW38 1151 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 THAP4Q8WY91 577 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 C10orf90Q96M02 699 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 ST6GALNAC2Q9UJ37 374 aa12.82□□□□□ -0.36
MKS1-201ENST00000313863 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
MKS1-201ENST00000313863 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 MEN1O00255 615 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 UCHL1P09936 223 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 OR2T7P0C7T2 308 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 ATF1P18846 271 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 NOS3P29474 1203 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 GDI2P50395 445 aaKnown RBP12.81□□□□□ -0.36
MKS1-201ENST00000313863 CCR6P51684 374 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 ERVFC1P60507 584 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
MKS1-201ENST00000313863 BAMBIQ13145 260 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 RPE65Q16518 533 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 MRPL2Q5T653 305 aaKnown RBP12.81□□□□□ -0.36
MKS1-201ENST00000313863 ZCCHC12Q6PEW1 402 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 FAM71CQ8NEG0 241 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 OR13C2Q8NGS9 318 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 OR2T27Q8NH04 317 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 NT5CQ8TCD5 201 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 MRI1Q9BV20 369 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 GSDMCQ9BYG8 508 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
MKS1-201ENST00000313863 COLEC10Q9Y6Z7 277 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms