RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 OR8D4Q8NGM9 314 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 PISDQ9UG56 409 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 PTRH2Q9Y3E5 179 aaKnown RBP17.33■□□□□ 0.36
TRIM47-201ENST00000254816 MPDZO75970 2070 aa17.33■□□□□ 0.36
TRIM47-201ENST00000254816 STSP08842 583 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 TBXA2RP21731 343 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 GINS1Q14691 196 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 ALG10BQ5I7T1 473 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 LRFN5Q96NI6 719 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 KLHDC3Q9BQ90 382 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 DPH1Q9BZG8 443 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 TRIM2Q9C040 744 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 STRADBQ9C0K7 418 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 WDR54Q9H977 334 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 ZBTB20Q9HC78 741 aaPredicted RBP17.32■□□□□ 0.36
TRIM47-201ENST00000254816 SLC35A3Q9Y2D2 325 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 CLCA1A8K7I4 914 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 MRPS14O60783 128 aaKnown RBP17.32■□□□□ 0.36
TRIM47-201ENST00000254816 UBL4AP11441 157 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 CCR4P51679 360 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 CSNK2BP67870 215 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 C12orf73Q69YU5 71 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 ACSM5Q6NUN0 579 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 TOR1AIP2Q8NFQ8 470 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 DYNC2LI1Q8TCX1 351 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 BCL7BQ9BQE9 202 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 EVA1AQ9H8M9 152 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 FAIMQ9NVQ4 179 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 TOR4AQ9NXH8 423 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 IL20RAQ9UHF4 553 aa17.32■□□□□ 0.36
TRIM47-201ENST00000254816 M0R082 166 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 GTPBP1O00178 669 aaKnown RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 TNFRSF10AO00220 468 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 WWP2O00308 870 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 KLF4O43474 513 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CHP2O43745 196 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CSO75390 466 aaKnown RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 KLF7O75840 302 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 STK17BO94768 372 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CDK1P06493 297 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 UMODP07911 640 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 IFI30P13284 250 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 MAKP20794 623 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 SLC26A5P58743 744 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 TCF15Q12870 199 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CLEC12AQ5QGZ9 265 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 DHRS13Q6UX07 377 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 MARCH3Q86UD3 253 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 LSMEM1Q8N8F7 131 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 OR5M3Q8NGP4 307 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 VMP1Q96GC9 406 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 MEPEQ9NQ76 525 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 PLCXD1Q9NUJ7 323 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 TAS2R16Q9NYV7 291 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 TVP23BQ9NYZ1 205 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 RPS6KB2Q9UBS0 482 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 C19orf25Q9UFG5 118 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 PCNX2A6NKB5 2137 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 C9J4A7 227 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 FPR3P25089 353 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 GIPRP48546 466 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 SKP2Q13309 424 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 NCF4Q15080 339 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 ZSWIM7Q19AV6 140 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CASP12Q6UXS9 341 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF517Q6ZMY9 492 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 DCDC5Q6ZRR9 648 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 RASSF6Q6ZTQ3 369 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 SNX29P2Q8IUI4 249 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 CENPSQ8N2Z9 138 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 FAM71CQ8NEG0 241 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 LGALS12Q96DT0 336 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 FAM86C1Q9NVL1 165 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 FKBP14Q9NWM8 211 aa17.31■□□□□ 0.36
TRIM47-201ENST00000254816 PPIEQ9UNP9 301 aaKnown RBP17.31■□□□□ 0.36
TRIM47-201ENST00000254816 A0A1W2PNU3 283 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-201ENST00000254816 TMEM200CA6NKL6 621 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 EFCAB9A8MZ26 197 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 CLDN25C9JDP6 229 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 NGFRP08138 427 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ADH7P40394 386 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 CDK5Q00535 292 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 E2F1Q01094 437 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 DGUOKQ16854 277 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 TIGD6Q17RP2 521 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 BCDIN3DQ7Z5W3 292 aaKnown RBP17.3■□□□□ 0.36
TRIM47-201ENST00000254816 STX19Q8N4C7 294 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 TCEANCQ8N8B7 351 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 C17orf47Q8NEP4 570 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 TEX47Q8TBZ9 253 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF524Q96C55 264 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 AKIP1Q9NQ31 210 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 NXT1Q9UKK6 140 aaKnown RBP17.3■□□□□ 0.36
TRIM47-201ENST00000254816 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF264O43296 627 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 JMJD7P0C870 316 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 STAT5AP42229 794 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 NUBP1P53384 320 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms