RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZNF267Q14586 743 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PXDC1Q5TGL8 231 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 HDDC2Q7Z4H3 204 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 WFIKKN2Q8TEU8 576 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 GHSRQ92847 366 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 INSM2Q96T92 566 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF436Q9C0F3 470 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 OR51V1Q9H2C8 321 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 MTHFD2LQ9H903 347 aaPredicted RBP18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 KCMF1Q9P0J7 381 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PCDH10Q9P2E7 1040 aa18.16■□□□□ 0.5
PDLIM3-212ENST00000620787 PRG2P13727 222 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC2A5P22732 501 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC16A1P53985 500 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 NRG3P56975 720 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 FOXK2Q01167 660 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 DYRK1AQ13627 763 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 FNDC3BQ53EP0 1204 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC22A10Q63ZE4 541 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 MFSD12Q6NUT3 480 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 MTFR2Q6P444 385 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 NLRC3Q7RTR2 1065 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SYT9Q86SS6 491 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 C7orf57Q8NEG2 295 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ACTR6Q9GZN1 396 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 AUNIPQ9H7T9 357 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF224Q9NZL3 707 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ABRACLQ9P1F3 81 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 CAMK2AQ9UQM7 478 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SCN3AQ9NY46 2000 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 TRAV1-2A0A0B4J238 106 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 A0A1W2PRG6 482 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 RHOP08100 348 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SAGP10523 405 aaPredicted RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 CLUP10909 449 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 EPXP11678 715 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 DRD5P21918 477 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 HTR2AP28223 471 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 PPM1AP35813 382 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 EEF1A1P68104 462 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SNTB2Q13425 540 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 HNRNPA1L2Q32P51 320 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 SSX6Q7RTT6 188 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 PRSS45Q7RTY3 260 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 RAB42Q8N4Z0 105 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 OR7G2Q8NG99 324 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 OR2T35Q8NGX2 323 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ORAI3Q9BRQ5 295 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 C20orf85Q9H1P6 137 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ZCCHC4Q9H5U6 513 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 MRPS30Q9NP92 439 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 BRD7Q9NPI1 651 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 APOBEC3BQ9UH17 382 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ST6GALNAC2Q9UJ37 374 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 WDR45Q9Y484 360 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF780BQ9Y6R6 833 aa18.15■□□□□ 0.5
PDLIM3-212ENST00000620787 DOCK9Q9BZ29 2069 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 TRAPPC13A5PLN9 417 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 FAM86C2PA6NEL3 165 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 LYPD3O95274 346 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 ADH5P11766 374 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 BMP7P18075 431 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 RAB28P51157 221 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 FCRLBQ6BAA4 426 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 ASPGQ86U10 573 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 ZNF527Q8NB42 609 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 SMIM4Q8WVI0 70 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 METTL17Q9H7H0 456 aaPredicted RBP18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 ZNF275Q9NSD4 429 aaPredicted RBP18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 FKBP7Q9Y680 259 aa18.14■□□□□ 0.49
PDLIM3-212ENST00000620787 EDDM13A0A1B0GTR0 161 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 DUXAA6NLW8 204 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 PYCR1P32322 319 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 NTHL1P78549 312 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 MS4A15Q8N5U1 240 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 GALNT11Q8NCW6 608 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 TMEM239Q8WW34 195 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 SMPDL3BQ92485 455 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 PEX11GQ96HA9 241 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 SMAD5Q99717 465 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 IFT27Q9BW83 186 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 SPRTNQ9H040 489 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 LYARQ9NX58 379 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 KLF15Q9UIH9 416 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 A0A1W2PPK0 400 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 CTDSPLO15194 276 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 PEX14O75381 377 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 TOXO94900 526 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 GDNFP39905 211 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 ELAVL3Q14576 367 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 MAPK14Q16539 360 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 GARNL3Q5VVW2 1013 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 FAAH2Q6GMR7 532 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 BAIAP2L2Q6UXY1 529 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 RANBP3LQ86VV4 465 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 ADGRG3Q86Y34 549 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 IZUMO1Q8IYV9 350 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 FTMTQ8N4E7 242 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms