RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 AP3S1Q92572 193 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 TBC1D20Q96BZ9 403 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 TMEM19Q96HH6 336 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 TMED9Q9BVK6 235 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 SPNS1Q9H2V7 528 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 NEUROD4Q9HD90 331 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 NUDT15Q9NV35 164 aa10.12□□□□□ -0.79
FAM3A-221ENST00000612856 ZMAT5Q9UDW3 170 aaKnown RBP10.12□□□□□ -0.79
FAM3A-221ENST00000612856 ZFYVE26Q68DK2 2539 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 A0A1W2PQF6 199 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 DCDC2BA2VCK2 349 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SLC16A6O15403 523 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ZNF821O75541 412 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 EML2O95834 649 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 STOMP27105 288 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TAS2R38P59533 333 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 PIN1Q13526 163 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 IRF3Q14653 427 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SPHARQ15513 63 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 C9orf135Q5VTT2 229 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 XKRXQ6PP77 449 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 Q6ZSR9 355 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 GLRX5Q86SX6 157 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CRIPAKQ8N1N5 446 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 FTMTQ8N4E7 242 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 OR2T35Q8NGX2 323 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 FOXN4Q96NZ1 517 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 MS4A7Q9GZW8 240 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TMEM9BQ9NQ34 198 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TMEFF2Q9UIK5 374 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TSC2P49815 1807 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 FAM171A2A8MVW0 826 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CDK1P06493 297 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ATP12AP54707 1039 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 PFN3P60673 137 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TMEM225Q6GV28 225 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 FRMPD2BQ6IN97 320 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SLCO4C1Q6ZQN7 724 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 OR10H4Q8NGA5 316 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 OR6N1Q8NGY5 312 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SETD6Q8TBK2 473 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TRAF4Q9BUZ4 470 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 RLIMQ9NVW2 624 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 FAM120CQ9NX05 1096 aaKnown RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 COPZ2Q9P299 210 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 PADI1Q9ULC6 663 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CCDC168Q8NDH2 2452 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TCF20Q9UGU0 1960 aaKnown RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 TRIM64A6NGJ6 449 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SPINT1O43278 529 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CPMP14384 443 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ARSBP15848 533 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 HBA1P69905 142 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 SIGLEC14Q08ET2 396 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 LAIR2Q6ISS4 152 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 REEP3Q6NUK4 255 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 DLEU7Q6UYE1 221 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ABI3BPQ7Z7G0 1075 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 OR8J3Q8NGG0 315 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 CRELD1Q96HD1 420 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 KCTD7Q96MP8 289 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 DKKL1Q9UK85 242 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ENTPD2Q9Y5L3 495 aa10.11□□□□□ -0.79
FAM3A-221ENST00000612856 ARHGEF17Q96PE2 2063 aaPredicted RBP10.11□□□□□ -0.79
FAM3A-221ENST00000612856 H7C2Y5 167 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 FGF4P08620 206 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 ENPP1P22413 925 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 KDELR2P33947 212 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 NUDT1P36639 197 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 RPS5P46782 204 aaKnown RBP10.1□□□□□ -0.79
FAM3A-221ENST00000612856 GMFBP60983 142 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 BTG2P78543 158 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 HSD11B2P80365 405 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 SCRN3Q0VDG4 424 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 CBLBQ13191 982 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 SYPL1Q16563 259 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 SLC5A12Q1EHB4 618 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 LAIR1Q6GTX8 287 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 CNIH2Q6PI25 160 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 TSPEARQ8WU66 669 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 KIR3DX1Q9H7L2 352 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 B3GNT2Q9NY97 397 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 NSG1A0A0A6YYJ2 146 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 GPX5O75715 221 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 GATBO75879 557 aaKnown RBP10.1□□□□□ -0.79
FAM3A-221ENST00000612856 AIFM1O95831 613 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 CTRB1P17538 263 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 GRPRP30550 384 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 FOLR3P41439 243 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 RFX2P48378 723 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 ETV1P50549 477 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 ARG2P78540 354 aa10.1□□□□□ -0.79
FAM3A-221ENST00000612856 GALNT1Q10472 559 aaPredicted RBP10.1□□□□□ -0.79
FAM3A-221ENST00000612856 FADDQ13158 208 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms