RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZNF764Q96H86 408 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 FOXN4Q96NZ1 517 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 POTEKPQ9BYX7 375 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 CENPHQ9H3R5 247 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 GLIPR2Q9H4G4 154 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 TMED5Q9Y3A6 229 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 ACTL7BQ9Y614 415 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 TM9SF1O15321 606 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 NDUFB5O43674 189 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 SLITRK5O94991 958 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 NTSP30990 170 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 SRP14P37108 136 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 NR4A2P43354 598 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 FABP6P51161 128 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 EFNA4P52798 201 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 DEFA6Q01524 100 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 HBMQ6B0K9 141 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 TMEM107Q6UX40 140 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 APOOLQ6UXV4 268 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 CROCCP2Q86T23 111 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 NUDCD3Q8IVD9 361 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 OR2V1Q8NHB1 315 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 CLHC1Q8NHS4 586 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 AMDHD1Q96NU7 426 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 TSSK3Q96PN8 268 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 GIMAP2Q9UG22 337 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
SHKBP1-208ENST00000595726 A0A087WV62 115 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 H7C417 338 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 BIRC5O15392 142 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 ITM2AO43736 263 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 TBX19O60806 448 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 COQ9O75208 318 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 SKAP2O75563 359 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 LYPLA1O75608 230 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PSMG1O95456 288 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 SERPINE1P05121 402 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 EDNRAP25101 427 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 MRPS22P82650 360 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PSG6Q00889 435 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PDE7AQ13946 482 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 MPP2Q14168 576 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 CARTPTQ16568 116 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 GTF2IRD2BQ6EKJ0 949 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 ANKRD26P1Q6NSI1 321 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 GTF2IRD2Q86UP8 949 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 KLHDC3Q9BQ90 382 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PAQR5Q9NXK6 330 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 STOML1Q9UBI4 398 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 BAIAP2L1Q9UHR4 511 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 PRSS50Q9UI38 385 aa12.12□□□□□ -0.47
SHKBP1-208ENST00000595726 NOTCH1P46531 2555 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 C9JVG2 144 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 UPK1AO00322 258 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 PDPK1O15530 556 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 AKAP10O43572 662 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 PEX11AO75192 247 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ERLIN1O75477 346 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 HSPA4LO95757 839 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 IFI6P09912 130 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 BCKDHAP12694 445 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 SHC1P29353 583 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ASMTP46597 345 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 RFX3P48380 749 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF83P51522 516 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 CARD18P57730 90 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ACTG1P63261 375 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF155Q12901 538 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 BEND6Q5SZJ8 279 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 OR2L13Q8N349 312 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF781Q8N8C0 355 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 CIDECQ96AQ7 238 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF775Q96BV0 537 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 PPCDCQ96CD2 204 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 RNF145Q96MT1 663 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 SRXN1Q9BYN0 137 aa12.11□□□□□ -0.47
SHKBP1-208ENST00000595726 DDX18Q9NVP1 670 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms