RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR6K3Q8NGY3 331 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ROBO4Q8WZ75 1007 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 NINJ1Q92982 152 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ARL8AQ96BM9 186 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 GMPPAQ96IJ6 420 aaPredicted RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 MAELQ96JY0 434 aaKnown RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 MARK4Q96L34 752 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 OR52E6Q96RD3 313 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PANX1Q96RD7 426 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 THUMPD3Q9BV44 507 aaKnown RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 SRXN1Q9BYN0 137 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 CCM2LQ9NUG4 571 aaPredicted RBP12.42□□□□□ -0.42
APOC1-208ENST00000592535 ELOVL5Q9NYP7 299 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 NDRG3Q9UGV2 375 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 PLEKHA6Q9Y2H5 1048 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 EMC9Q9Y3B6 208 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 WDR45Q9Y484 360 aa12.42□□□□□ -0.42
APOC1-208ENST00000592535 AKAP9Q99996 3911 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 A0A1W2PPR1 153 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 HMGN4O00479 90 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CASKO14936 926 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 BCAS1O75363 584 aaPredicted RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 GOSR1O95249 250 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CSTAP01040 98 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 GSNP06396 782 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 UGT2B10P36537 528 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CTBP2P56545 445 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CARD18P57730 90 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 CBFBQ13951 182 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 ZNF239Q16600 458 aaKnown RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 EXOC3L2Q2M3D2 409 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 TMEM176BQ3YBM2 270 aaPredicted RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 PDCD4Q53EL6 469 aaKnown RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 SLC25A53Q5H9E4 307 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 AGBL2Q5U5Z8 902 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 FRRS1Q6ZNA5 592 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 RNF130Q86XS8 419 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 ZNF619Q8N2I2 560 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 ZNF75CPQ92670 426 aaPredicted RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 WFIKKN1Q96NZ8 548 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 OR52B2Q96RD2 323 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 ZBTB18Q99592 522 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 TEP1Q99973 2627 aaKnown RBP12.41□□□□□ -0.42
APOC1-208ENST00000592535 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 SAP130Q9H0E3 1048 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 COQ10BQ9H8M1 238 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 POLE3Q9NRF9 147 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 KLHL28Q9NXS3 571 aa12.41□□□□□ -0.42
APOC1-208ENST00000592535 GJE1A6NN92 205 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 KLF11O14901 512 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 DNAJA2O60884 412 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 GUSBP08236 651 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 UBTFL6P0CB48 400 aaPredicted RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 NID1P14543 1247 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 IDO1P14902 403 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 CD1EP15812 388 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 PGM1P36871 562 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 CHRNEQ04844 493 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 SELENBP1Q13228 472 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 GPAT3Q53EU6 434 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 PAMR1Q6UXH9 720 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 ZNF621Q6ZSS3 439 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 TRIML2Q8N7C3 387 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 GLB1L3Q8NCI6 653 aaPredicted RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 ZFP90Q8TF47 636 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 ABHD3Q8WU67 409 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 ZG16BQ96DA0 208 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 QRSL1Q9H0R6 528 aaKnown RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 PLEKHF2Q9H8W4 249 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 PRRC2AP48634 2157 aaKnown RBP12.4□□□□□ -0.42
APOC1-208ENST00000592535 FREM1Q5H8C1 2179 aa12.4□□□□□ -0.42
APOC1-208ENST00000592535 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 SIAH2O43255 324 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 SLC22A3O75751 556 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 H6PDO95479 791 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 DNASE1P24855 282 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 AGTR1P30556 359 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 SESN3P58005 492 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 HPCAP84074 193 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 PLAURQ03405 335 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 LRRC74AQ0VAA2 488 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 SYPL1Q16563 259 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 TIGD2Q4W5G0 525 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 COX20Q5RI15 118 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 AP1ARQ63HQ0 302 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 ANKRD34AQ69YU3 496 aa12.39□□□□□ -0.43
APOC1-208ENST00000592535 DNAJC14Q6Y2X3 702 aaPredicted RBP12.39□□□□□ -0.43
APOC1-208ENST00000592535 ANKFN1Q8N957 763 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms