RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC7A1P30825 629 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
SS18-225ENST00000585121 SFTPDP35247 375 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 FAM27E3Q08E93 113 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 GSTA3Q16772 222 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
SS18-225ENST00000585121 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 HEPHL1Q6MZM0 1159 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 CDC20BQ86Y33 519 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 TMEM234Q8WY98 164 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 RAB8BQ92930 207 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 NINJ1Q92982 152 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 ARSGQ96EG1 525 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 TEX37Q96LM6 180 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 SLC35A3Q9Y2D2 325 aa11.1□□□□□ -0.63
SS18-225ENST00000585121 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 UBDO15205 165 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 POLR3GO15318 223 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 KIAA0513O60268 411 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 UGT2B17O75795 530 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 KRT75O95678 551 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 UBTFL6P0CB48 400 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 PRKCAP17252 672 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 SLC6A8P48029 635 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 SELENBP1Q13228 472 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 CTU2Q2VPK5 515 aaKnown RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 NDUFAF6Q330K2 333 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 STK32CQ86UX6 486 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ZNF619Q8N2I2 560 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 CPNE4Q96A23 557 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 ROPN1LQ96C74 230 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 NPAS1Q99742 590 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 MED18Q9BUE0 208 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 RMND5AQ9H871 391 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 ZNF226Q9NYT6 803 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 CLEC4AQ9UMR7 237 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 LIPT1Q9Y234 373 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 MED12LQ86YW9 2145 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 C9JVG2 144 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 RFXANKO14593 260 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 MPDZO75970 2070 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ANP32DO95626 131 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 CGAP01215 116 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 IL12AP29459 219 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ART1P52961 327 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 CBX1P83916 185 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 GNA13Q14344 377 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 QPRTQ15274 297 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 TOMM34Q15785 309 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 SLC9B1Q4ZJI4 515 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ZNF474Q6S9Z5 364 aaPredicted RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 RNF130Q86XS8 419 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ZNF563Q8TA94 476 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 DYDC1Q8WWB3 177 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 NRGNQ92686 78 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 MAELQ96JY0 434 aaKnown RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
SS18-225ENST00000585121 KLHL4Q9C0H6 718 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 PCNX3Q9H6A9 2034 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 PLSCR4Q9NRQ2 329 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ST6GALNAC2Q9UJ37 374 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 ADAM21Q9UKJ8 722 aa11.09□□□□□ -0.63
SS18-225ENST00000585121 HMGN4O00479 90 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 GSNP06396 782 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 IL11P20809 199 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 UGT2B10P36537 528 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 MAGEA8P43361 318 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 IST1P53990 364 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 STX1BP61266 288 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 SKP2Q13309 424 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 ZNF239Q16600 458 aaKnown RBP11.08□□□□□ -0.64
SS18-225ENST00000585121 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
SS18-225ENST00000585121 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 SPNS3Q6ZMD2 512 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 MSANTD1Q6ZTZ1 278 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 OLIG3Q7RTU3 272 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 MIER2Q8N344 545 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 SLC43A2Q8N370 569 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 ZFP90Q8TF47 636 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
SS18-225ENST00000585121 ITCHQ96J02 903 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms