RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 APOHP02749 345 aaPredicted RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 SERPINA7P05543 415 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 H1F0P07305 194 aaKnown RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 HBQ1P09105 142 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 PATE4P0C8F1 98 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 GNAZP19086 355 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 GABRA5P31644 462 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 PRPHP41219 470 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 RGS7P49802 495 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 KHKP50053 298 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 ATP5J2P56134 94 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 DCDP81605 110 aaKnown RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 RAD51Q06609 339 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 GPRC6AQ5T6X5 926 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 RTL6Q6ICC9 239 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 PMF1Q6P1K2 205 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 ARHGAP11AQ6P4F7 1023 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 TEX38Q6PEX7 206 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 FIGLAQ6QHK4 219 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 PPP1R21Q6ZMI0 780 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 MDS2Q8NDY4 140 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 TRIM58Q8NG06 486 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 TSPAN14Q8NG11 270 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 OR2AJ1Q8NGZ0 328 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 UBA3Q8TBC4 463 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 RAD54LQ92698 747 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 SLCO2A1Q92959 643 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 NUS1Q96E22 293 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 CELF6Q96J87 481 aaKnown RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 VPS39Q96JC1 886 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 GDAP1L1Q96MZ0 367 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 ZNF830Q96NB3 372 aaPredicted RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 RBM4Q9BWF3 364 aaKnown RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 SLC7A5P2Q9GIP4 190 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 FANCEQ9HB96 536 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 SYTL2Q9HCH5 934 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 DHCR7Q9UBM7 475 aaKnown RBP4.98□□□□□ -1.61
RTF1-204ENST00000558117 FAM215AQ9Y5M1 114 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 ALG6Q9Y672 507 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 STAB2Q8WWQ8 2551 aa4.98□□□□□ -1.61
RTF1-204ENST00000558117 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 OOEPA6NGQ2 149 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 E7EQ34 232 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 H3BMH7 237 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 SLC33A1O00400 549 aaPredicted RBP4.97□□□□□ -1.61
RTF1-204ENST00000558117 GAPDHSO14556 408 aaPredicted RBP4.97□□□□□ -1.61
RTF1-204ENST00000558117 MAPK13O15264 365 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 PFKFB2O60825 505 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 GBAP04062 536 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CD48P09326 243 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 IGHV4-38-2P0DP08 117 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 ERVK-10P10266 1014 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 SLC2A3P11169 496 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 ZNF24P17028 368 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 ACHEP22303 614 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 OR1E1P30953 314 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CCR1P32246 355 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 ASCL1P50553 236 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 ARFIP1P53367 373 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 AP3M2P53677 418 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CASP9P55211 416 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 SIRPAP78324 504 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 GNA12Q03113 381 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 RPS6KA1Q15418 735 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 TMEM249Q2WGJ8 235 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 NKAIN1Q4KMZ8 207 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 FAM120AOSQ5T036 256 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 GRTP1Q5TC63 336 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 RHBDD2Q6NTF9 364 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 LEKR1Q6ZMV7 388 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 DNM1P46Q6ZS02 220 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 PLD3Q8IV08 490 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 GPALPP1Q8IXQ4 340 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 NHLRC2Q8NBF2 726 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CFAP61Q8NHU2 1237 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 LPGAT1Q92604 370 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CACNG6Q9BXT2 260 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 MRM3Q9HC36 420 aaKnown RBP4.97□□□□□ -1.61
RTF1-204ENST00000558117 ACKR4Q9NPB9 350 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 SLC52A3Q9NQ40 469 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 OLFML3Q9NRN5 406 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 SOHLH2Q9NX45 425 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CHMP5Q9NZZ3 219 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 CGNQ9P2M7 1197 aaKnown RBP4.97□□□□□ -1.61
RTF1-204ENST00000558117 SMC3Q9UQE7 1217 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.97□□□□□ -1.617e-8■■□□□ 13.1
RTF1-204ENST00000558117 SCN2AQ99250 2005 aa4.97□□□□□ -1.61
RTF1-204ENST00000558117 HERC1Q15751 4861 aa4.96□□□□□ -1.61
RTF1-204ENST00000558117 A8MX80 341 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 MAGEB17A8MXT2 336 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 PIN1P1O15428 100 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 XRCC3O43542 346 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 BUB1O43683 1085 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 NOL3O60936 208 aaKnown RBP4.96□□□□□ -1.62
RTF1-204ENST00000558117 HLA-DRAP01903 254 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 FAM58BPP0C7Q3 252 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 NR0B1P51843 470 aaKnown RBP4.96□□□□□ -1.62
RTF1-204ENST00000558117 CDH11P55287 796 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 ERVK11-1P61568 191 aa4.96□□□□□ -1.62
RTF1-204ENST00000558117 HMGN5P82970 282 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms