RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ZNF81P51508 661 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 FXYD6P3P58550 94 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 RAB8AP61006 207 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ACTA2P62736 377 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ACTG2P63267 376 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 E2F1Q01094 437 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF85Q03923 595 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 MLF2Q15773 248 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SLC25A35Q3KQZ1 300 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ELFN2Q5R3F8 820 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 MTSS1LQ765P7 747 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 BMP8AQ7Z5Y6 402 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SLC51BQ86UW2 128 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 COMMD7Q86VX2 200 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 OR2L13Q8N349 312 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 UXS1Q8NBZ7 420 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 FAM71CQ8NEG0 241 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 NXPE3Q969Y0 559 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 MRPL48Q96GC5 212 aaKnown RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 TBX5Q99593 518 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 IFT27Q9BW83 186 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF350Q9GZX5 532 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 TM7SF3Q9NS93 570 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 TCF20Q9UGU0 1960 aaKnown RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 E9PI62 339 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 I3L521 148 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 J3QLW9 94 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF593O00488 134 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 BET1O15155 118 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SSNA1O43805 119 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 IFNGP01579 166 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 HNRNPA1P09651 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 CD3GP09693 182 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 RRASP10301 218 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 PRG2P13727 222 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF19P17023 458 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 LCN1P31025 176 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 PTGER1P34995 402 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 EXOSC2Q13868 293 aaKnown RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ST3GAL2Q16842 350 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 PLPP4Q5VZY2 271 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 RTL4Q6ZR62 310 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 C12orf40Q86WS4 652 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ADGRG3Q86Y34 549 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF619Q8N2I2 560 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SLC16A11Q8NCK7 471 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 OR2L3Q8NG85 312 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 OR4C6Q8NH72 309 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SMPDL3BQ92485 455 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 CDS1Q92903 461 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 LCORQ96JN0 433 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 MRI1Q9BV20 369 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF436Q9C0F3 470 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-231ENST00000557433 KIF25Q9UIL4 384 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 ST6GALNAC2Q9UJ37 374 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 SIGLEC7Q9Y286 467 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 MED31Q9Y3C7 131 aa15.09■□□□□ 0.01
SHMT2-231ENST00000557433 LOC105369274A0A096LPK9 316 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 CDHR4A6H8M9 788 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 PRRT4C9JH25 899 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 KHNYNO15037 678 aaKnown RBP15.08■□□□□ 0
SHMT2-231ENST00000557433 REM1O75628 298 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 AK1P00568 194 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 UCHL1P09936 223 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 MAKP20794 623 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 NT5EP21589 574 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 DGCR2P98153 550 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 FGFBP1Q14512 234 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 KRT33BQ14525 404 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 OR1Q1Q15612 314 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 FAM27D1Q5T7N8 215 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 METTL11BQ5VVY1 283 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 SEZ6L2Q6UXD5 910 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 SLC39A5Q6ZMH5 540 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 OR4N4Q8N0Y3 316 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 LSMEM1Q8N8F7 131 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 ZNF527Q8NB42 609 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 KAT2AQ92830 837 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 GHSRQ92847 366 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 C10orf90Q96M02 699 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 SDF2Q99470 211 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 DPCDQ9BVM2 203 aaPredicted RBP15.08■□□□□ 0
SHMT2-231ENST00000557433 SPRTNQ9H040 489 aaPredicted RBP15.08■□□□□ 0
SHMT2-231ENST00000557433 MED20Q9H944 212 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 NANSQ9NR45 359 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 CLDND1Q9NY35 253 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 TBX21Q9UL17 535 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 HEATR5BQ9P2D3 2071 aa15.08■□□□□ 0
SHMT2-231ENST00000557433 A0A1B0GUH1 482 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 SULT1B1O43704 296 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 LYPD3O95274 346 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 CLTBP09497 229 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 IFI6P09912 130 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 NID1P14543 1247 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 PRKACBP22694 351 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 CCR9P51686 369 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms