RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	C14orf105	Q9NVL8	296 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC17A6	Q9P2U8	582 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	DNAJB9	Q9UBS3	223 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	KCND3	Q9UK17	655 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	SSUH2	Q9Y2M2	353 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC6A5	Q9Y345	797 aa		10.8	□□□□□ -0.68
BRCA1-222	ENST00000493919	CACNA1A	O00555	2505 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	PNMA8C	A0A1B0GUJ8	204 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	MGAT4D	A6NG13	374 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919		A6NIZ1	184 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	DUXA	A6NLW8	204 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR52A4P	A6NMU1	304 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TSTD3	H0UI37	97 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC35G4	P0C7Q5	338 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	FOLR2	P14207	255 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	ACP1	P24666	158 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	AGFG1	P52594	562 aa	Known RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	E2F1	Q01094	437 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	EPS8	Q12929	822 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLA	Q13239	276 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	IL18R1	Q13478	541 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TM4SF20	Q53R12	229 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	KDM4D	Q6B0I6	523 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	LPCAT3	Q6P1A2	487 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TRMT10B	Q6PF06	316 aa	Known RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	SCIMP	Q6UWF3	145 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC46A3	Q7Z3Q1	461 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF761	Q86XN6	746 aa	Predicted RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	MISP	Q8IVT2	679 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TRIM48	Q8IWZ4	208 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	CFAP206	Q8IYR0	622 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	PLD6	Q8N2A8	252 aa	Known RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TMEM132C	Q8N3T6	1108 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	FAM47B	Q8NA70	645 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR2L2	Q8NH16	312 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	TSPAN17	Q96FV3	270 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	FYTTD1	Q96QD9	318 aa	Known RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	PCGF1	Q9BSM1	259 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	DHRS4	Q9BTZ2	278 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	EVA1A	Q9H8M9	152 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	PLEKHA6	Q9Y2H5	1048 aa		10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919	CFAP20	Q9Y6A4	193 aa	Known RBP	10.79	□□□□□ -0.68
BRCA1-222	ENST00000493919		F5H0A9	414 aa	Predicted RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	KLF4	O43474	513 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	FMO3	P31513	532 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CCR4	P51679	360 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	LIMK2	P53671	638 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CLDN6	P56747	220 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	HHEX	Q03014	270 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	FOXC1	Q12948	553 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF789	Q5FWF6	425 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	NXPE4	Q6UWF7	544 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	TMIGD1	Q6UXZ0	262 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	SFRP1	Q8N474	314 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF383	Q8NA42	475 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	GPR150	Q8NGU9	434 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	TFAP2C	Q92754	450 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	ABHD17A	Q96GS6	310 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	LINC00615	Q96LM1	132 aa	Predicted RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CCDC3	Q9BQI4	270 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CNPPD1	Q9BV87	410 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	REEP4	Q9H6H4	257 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	BCO1	Q9HAY6	547 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	PLAC1	Q9HBJ0	212 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	IMP3	Q9NV31	184 aa	Known RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	SMPD3	Q9NY59	655 aa	Predicted RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	LRIT1	Q9P2V4	623 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	STUB1	Q9UNE7	303 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919		A0A0G2JND7	137 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919		A8MV72	311 aa	Predicted RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	RHBDL1	O75783	438 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	SUPT7L	O94864	414 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	PNP	P00491	289 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CREB1	P16220	341 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	GLB1	P16278	677 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	ME2	P23368	584 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	S100A11	P31949	105 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	MAGEA2	P43356	314 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	POU4F2	Q12837	409 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	AQP6	Q13520	282 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF239	Q16600	458 aa	Known RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	GUCA2B	Q16661	112 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	BROX	Q5VW32	411 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	STEAP4	Q687X5	459 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	RBMS3	Q6XE24	437 aa	Known RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	RASSF6	Q6ZTQ3	369 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	PEG10	Q86TG7	708 aa	Known RBP	10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	GPR137C	Q8N3F9	429 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR56A3	Q8NH54	315 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CPT1C	Q8TCG5	803 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	FKBP10	Q96AY3	582 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	CXorf40B	Q96DE9	158 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	MED8	Q96G25	268 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	C12orf66	Q96MD2	445 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	SORCS2	Q96PQ0	1159 aa		10.78	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR14A2	Q96R54	314 aa		10.78	□□□□□ -0.68

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