RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 Q6ZSR6 202 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 GLCCI1Q86VQ1 547 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 CSNK1A1LQ8N752 337 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 OR51A7Q8NH64 312 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 OR5W2Q8NH69 310 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 GRHL3Q8TE85 626 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 PMM1Q92871 262 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 ZC3HAV1LQ96H79 300 aaKnown RBP11.4□□□□□ -0.58
PTCD2-204ENST00000486995 KCNJ15Q99712 375 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 OR51V1Q9H2C8 321 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 KCNN2Q9H2S1 579 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 NKX2-4Q9H2Z4 354 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 RBFOX1Q9NWB1 397 aaKnown RBP11.4□□□□□ -0.58
PTCD2-204ENST00000486995 FLRT3Q9NZU0 649 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 TMEM5Q9Y2B1 443 aa11.4□□□□□ -0.58
PTCD2-204ENST00000486995 A0A0B4J2E0 115 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 A0A1B0GX12 115 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC22A31A6NKX4 558 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SGK494L7N484 410 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 NKX2-2O95096 273 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CLUP10909 449 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ELK1P19419 428 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 PPP1CAP62136 330 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 YPEL5P62699 121 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ILF3Q12906 894 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 QPRTQ15274 297 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZC3H14Q6PJT7 736 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TRILQ7L0X0 811 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZNF655Q8N720 491 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 DUSP18Q8NEJ0 188 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 OR52R1Q8NGF1 315 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 GDF15Q99988 308 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZNF559Q9BR84 538 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TCEAL2Q9H3H9 227 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 RANGRFQ9HD47 186 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TRIM36Q9NQ86 728 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CLEC1BQ9P126 229 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 USP36Q9P275 1121 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FBXL4Q9UKA2 621 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC35A3Q9Y2D2 325 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 A0A0J9YY10 115 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CTSBP07858 339 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 MRPL3P09001 348 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 IFI6P09912 130 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC2A5P22732 501 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SHC1P29353 583 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 VSX2P58304 361 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 RPS7P62081 194 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 UBE2IP63279 158 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZNF438Q7Z4V0 828 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 GPBAR1Q8TDU6 330 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SMAP2Q8WU79 429 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FYTTD1Q96QD9 318 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CAPN10Q9HC96 672 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 POLE3Q9NRF9 147 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 POT1Q9NUX5 634 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZMIZ1Q9ULJ6 1067 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FANCMQ8IYD8 2048 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 A0A1B0GWA3 101 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FAM172BPA6NC97 362 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 PLPP2O43688 288 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC19A2O60779 497 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 MT-ND5P03915 603 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 NGFRP08138 427 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SBK2P0C263 348 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 S1PR1P21453 382 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ACAA2P42765 397 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 RFX3P48380 749 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC16A1P53985 500 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 PSG6Q00889 435 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 E2F1Q01094 437 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 DLX2Q07687 328 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FHL1Q13642 323 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CRMP1Q14194 572 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 NDUFA5Q16718 116 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ARL9Q6T311 187 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 PLET1Q6UQ28 207 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SLC22A18ASQ8N1D0 253 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 CYB561A3Q8NBI2 242 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 OR13H1Q8NG92 308 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ACOT12Q8WYK0 555 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 MRPL38Q96DV4 380 aaKnown RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 RNF170Q96K19 258 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 PTCHD1Q96NR3 888 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TNFRSF13CQ96RJ3 184 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 UBL7Q96S82 380 aaPredicted RBP11.39□□□□□ -0.59
PTCD2-204ENST00000486995 TTYH2Q9BSA4 534 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ZNF426Q9BUY5 554 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SYNDIG1Q9H7V2 258 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 C14orf105Q9NVL8 296 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 FBXL21Q9UKT6 434 aa11.39□□□□□ -0.59
PTCD2-204ENST00000486995 SYNDIG1LA6NDD5 238 aa11.38□□□□□ -0.59
PTCD2-204ENST00000486995 LYRM1O43325 122 aa11.38□□□□□ -0.59
PTCD2-204ENST00000486995 CHP2O43745 196 aa11.38□□□□□ -0.59
PTCD2-204ENST00000486995 PPP1R3DO95685 299 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms