RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TMEM176BQ3YBM2 270 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 ZNF672Q499Z4 452 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 C3orf33Q6P1S2 294 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 BHLHB9Q6PI77 547 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 BANPQ8N9N5 519 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 OR5W2Q8NH69 310 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 PIWIL2Q8TC59 973 aaKnown RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 ADAMTS15Q8TE58 950 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 SMAP2Q8WU79 429 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 OIT3Q8WWZ8 545 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 GTPBP3Q969Y2 492 aaKnown RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 COQ8BQ96D53 544 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 OTUB1Q96FW1 271 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 APOPT1Q96IL0 206 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 PRPF18Q99633 342 aaKnown RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 MDFIQ99750 246 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 PSD2Q9BQI7 771 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 RHOXF2Q9BQY4 288 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 C12orf65Q9H3J6 166 aaKnown RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 CXorf36Q9H7Y0 433 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 ING1Q9UK53 422 aaPredicted RBP11.53□□□□□ -0.56
ABCF3-212ENST00000478288 CARD8Q9Y2G2 431 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 FIS1Q9Y3D6 152 aa11.53□□□□□ -0.56
ABCF3-212ENST00000478288 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.56
ABCF3-212ENST00000478288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■■■□ 25.3
ABCF3-212ENST00000478288 GOLGA8QA0A0J9YX86 632 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 GOLGA8OA6NCC3 632 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ZNF724A8MTY0 619 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ZNF814B7Z6K7 855 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 GOLGA8NF8WBI6 632 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 GTPBP1O00178 669 aaKnown RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CLOCKO15516 846 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ZNF264O43296 627 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 OIP5O43482 229 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CYTIPO60759 359 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 AK1P00568 194 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ADAP00813 363 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CHRNGP07510 517 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 COX5AP20674 150 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 EFNA1P20827 205 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 PRPS1L1P21108 318 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 SLC7A1P30825 629 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 OR3A2P47893 321 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 TP53BP2Q13625 1128 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CBFBQ13951 182 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 VEZF1Q14119 521 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 PTGR1Q14914 329 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ATP6AP1LQ52LC2 224 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ARL13AQ5H913 290 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 DNM1P46Q6ZS02 220 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CXXC5Q7LFL8 322 aaKnown RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 BHLHA15Q7RTS1 189 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 DTX2Q86UW9 622 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 P2RY8Q86VZ1 359 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 GSPT2Q8IYD1 628 aaKnown RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 C4orf33Q8N1A6 199 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 RIBC1Q8N443 379 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 OR7A2PQ8NGA2 310 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ST8SIA1Q92185 356 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 TRIM2Q9C040 744 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 BHLHE41Q9C0J9 482 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 FAIMQ9NVQ4 179 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 ADAM21Q9UKJ8 722 aa11.52□□□□□ -0.57
ABCF3-212ENST00000478288 MAGED1Q9Y5V3 778 aaPredicted RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
ABCF3-212ENST00000478288 A0A1W2PP18 115 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 DUXAA6NLW8 204 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 ESPNB1AK53 854 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 GUSBP08236 651 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 UBL4AP11441 157 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 ENPP1P22413 925 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 QPRTQ15274 297 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 TOMM34Q15785 309 aaPredicted RBP11.51□□□□□ -0.57
ABCF3-212ENST00000478288 ZNF141Q15928 474 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 PGGHGQ32M88 737 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 SPDYE7PQ495Y7 208 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 RIMKLAQ8IXN7 391 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 LRRN4CLQ8ND94 238 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 RADILQ96JH8 1075 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 BARX1Q9HBU1 254 aaPredicted RBP11.51□□□□□ -0.57
ABCF3-212ENST00000478288 ANK2Q01484 3957 aa11.51□□□□□ -0.57
ABCF3-212ENST00000478288 NPIPA5A0A0B4J1W7 369 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 DPRXA6NFQ7 191 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 SERINC4A6NH21 518 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 NPIPA7E9PJI5 369 aa11.5□□□□□ -0.57
ABCF3-212ENST00000478288 SMAD9O15198 467 aaKnown RBP11.5□□□□□ -0.57
ABCF3-212ENST00000478288 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
ABCF3-212ENST00000478288 PGM3O95394 542 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms