RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 ICAM5Q9UMF0 924 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 DIMT1Q9UNQ2 313 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 EXOSC1Q9Y3B2 195 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 ABCA7Q8IZY2 2146 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 EML5Q05BV3 1969 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 THADAQ6YHU6 1953 aa7.31□□□□□ -1.24
VMA21-203ENST00000477649 TDRD6O60522 2096 aaKnown RBP7.31□□□□□ -1.24
VMA21-203ENST00000477649 TNRC6BQ9UPQ9 1833 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 A0A087WUJ7 227 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 CENPVL1A0A0U1RR11 272 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 OR6C70A6NIJ9 312 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 SAGE2PA6NJ88 616 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 EFCAB9A8MZ26 197 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 B4E171 279 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ALG1L2C9J202 215 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 D6RAR5 112 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 GTPBP1O00178 669 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 HRKO00198 91 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 KHNYNO15037 678 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 SURF4O15260 269 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZNF264O43296 627 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 IDH3BO43837 385 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ALOX12BO75342 701 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 BCAS1O75363 584 aaPredicted RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 UTS2O95399 124 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 RAB36O95755 333 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 IFNGP01579 166 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 IGKV1D-16P01601 117 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 THY1P04216 161 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 KLK3P07288 261 aaPredicted RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 STSP08842 583 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 GKN3PP0CG01 181 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 DBTP11182 482 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 IFI30P13284 250 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ACP1P24666 158 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 HTR1FP30939 366 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 SLC6A6P31641 620 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 UGT2B10P36537 528 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 TSPAN7P41732 249 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 RFX3P48380 749 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 MASP1P48740 699 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZNF91Q05481 1191 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZFP36L1Q07352 338 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 NFATC3Q12968 1075 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 DGUOKQ16854 277 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 FNDC7Q5VTL7 733 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ACSM5Q6NUN0 579 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 SMARCD3Q6STE5 483 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 HSDL2Q6YN16 418 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 COX15Q7KZN9 410 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 HMGN2P46Q86SG4 172 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 KIF18BQ86Y91 864 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZNF614Q8N883 585 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 TMEM105Q8N8V8 129 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZNF441Q8N8Z8 693 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 OR4N2Q8NGD1 307 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 FANK1Q8TC84 345 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 LIPHQ8WWY8 451 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 FGF11Q92914 225 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 TSLPQ969D9 159 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 VMP1Q96GC9 406 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZNF582Q96NG8 517 aaPredicted RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 IL4I1Q96RQ9 567 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 LPAR4Q99677 370 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 GPA33Q99795 319 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ZPBPQ9BS86 351 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 NUDT9Q9BW91 350 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 FAM117AQ9C073 453 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 WWTR1Q9GZV5 400 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 NXF5Q9H1B4 397 aaKnown RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 FBXO8Q9NRD0 319 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 CTPS2Q9NRF8 586 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 INPP5EQ9NRR6 644 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 GPR83Q9NYM4 423 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 CNIH4Q9P003 139 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 ATXN7L1Q9ULK2 861 aaPredicted RBP7.3□□□□□ -1.24
VMA21-203ENST00000477649 A3GALT2U3KPV4 340 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 SCN3AQ9NY46 2000 aa7.3□□□□□ -1.24
VMA21-203ENST00000477649 GOLGA4Q13439 2230 aaKnown RBP7.29□□□□□ -1.24
VMA21-203ENST00000477649 TMEM129A0AVI4 362 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 SLC22A31A6NKX4 558 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 CCRL2O00421 344 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 MYL12BO14950 172 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 HYAL3O43820 417 aaPredicted RBP7.29□□□□□ -1.24
VMA21-203ENST00000477649 PRKYO43930 277 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 CDC40O60508 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
VMA21-203ENST00000477649 TSPAN2O60636 221 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 PTP4A3O75365 173 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 REM1O75628 298 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 ATE1O95260 518 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 LDOC1O95751 146 aaPredicted RBP7.29□□□□□ -1.24
VMA21-203ENST00000477649 IGHEP01854 428 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 SCG5P05408 212 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 SP9P0CG40 484 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 ADORA3P0DMS8 318 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 SAGP10523 405 aaPredicted RBP7.29□□□□□ -1.24
VMA21-203ENST00000477649 PEPDP12955 493 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 PRG2P13727 222 aa7.29□□□□□ -1.24
VMA21-203ENST00000477649 APEHP13798 732 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms