RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM90A8PA6NJQ4 464 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM25AB3EWG3 89 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM25CB3EWG5 89 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM25GB3EWG6 89 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 DIRC3C9JPN6 131 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 DLGAP1O14490 977 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TRAFD1O14545 582 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 ADAM10O14672 748 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 UGT1A9O60656 530 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 RAMP3O60896 148 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TM7SF2O76062 418 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 OR2F2O95006 317 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CTDNEP1O95476 244 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ADAP00813 363 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 IFNGP01579 166 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM90A13PP0C7W8 464 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM90A24PP0C7X0 464 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 UCHL3P15374 230 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 NDUFB7P17568 137 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 PGAM1P18669 254 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TSPAN8P19075 237 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 HOXD9P28356 352 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 CD38P28907 300 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SSTR2P30874 369 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 NTSR1P30989 418 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ACVR1BP36896 505 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 OR3A3P47888 321 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 IDH2P48735 452 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 GLUD2P49448 558 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SUOXP51687 545 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 AKR1D1P51857 326 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ADPRHP54922 357 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FGF8P55075 233 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 F2RL1P55085 397 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CDH13P55290 713 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM33P57088 247 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ERVK-8P63133 956 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 TFAMQ00059 246 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 E2F1Q01094 437 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 MEF2AQ02078 507 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 FOLH1Q04609 750 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 DLG1Q12959 904 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ASAH1Q13510 395 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ZNF268Q14587 947 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 ACOX1Q15067 660 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TAF1AQ15573 450 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 OR4D1Q15615 310 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 HAGHQ16775 308 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 VWC2Q2TAL6 325 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CERCAMQ5T4B2 595 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TXNRD3NBQ6F5E7 133 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM225Q6GV28 225 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 DHRS7BQ6IAN0 325 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM211Q6ICI0 200 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ADNP2Q6IQ32 1131 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM180AQ6UWF9 173 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 Q7L0L9 218 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 DET1Q7L5Y6 550 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SLC16A14Q7RTX9 510 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMED4Q7Z7H5 227 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 S100A7AQ86SG5 101 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM90A1Q86YD7 464 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SYT12Q8IV01 421 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 NAXDQ8IW45 347 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ZNF683Q8IZ20 524 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 APCDD1Q8J025 514 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 EID3Q8N140 333 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 Q8N402 240 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 OR11L1Q8NGX0 322 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 FAM110DQ8TAY7 271 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 MAGEE2Q8TD90 523 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 WFIKKN2Q8TEU8 576 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ABHD5Q8WTS1 349 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM239Q8WW34 195 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 OTULINQ96BN8 352 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 PPWD1Q96BP3 646 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 TESCQ96BS2 214 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 NXNL1Q96CM4 212 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CMTM5Q96DZ9 223 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 COQ2Q96H96 371 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CELF6Q96J87 481 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 SERPINB11Q96P15 392 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 HOPXQ9BPY8 73 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 CCDC3Q9BQI4 270 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 SLC35A5Q9BS91 424 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TIMM29Q9BSF4 260 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TRMT61BQ9BVS5 477 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 NPLQ9BXD5 320 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 C1QTNF1Q9BXJ1 281 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TEX101Q9BY14 249 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TPSD1Q9BZJ3 242 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ACTL8Q9H568 366 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 KAT8Q9H7Z6 458 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 CALHM2Q9HA72 323 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms