RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 HSD17B7P56937 341 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 RPS7P62081 194 aaKnown RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 PPP1CAP62136 330 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 FOXK2Q01167 660 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 FABP5Q01469 135 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 CBX3Q13185 183 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SMAD4Q13485 552 aaKnown RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 GALEQ14376 348 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF141Q15928 474 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF791Q3KP31 576 aaPredicted RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ALG10BQ5I7T1 473 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 LCN1P1Q5VSP4 162 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ULK3Q6PHR2 472 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 METAP1DQ6UB28 335 aaPredicted RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 FAM131AQ6UXB0 335 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 WDR88Q6ZMY6 472 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 RTL4Q6ZR62 310 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 Q6ZS52 159 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 OAFQ86UD1 273 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 AKAP14Q86UN6 197 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 MARCH9Q86YJ5 346 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 LAX1Q8IWV1 398 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 BBS1Q8NFJ9 593 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 OR51G2Q8NGK0 314 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 NEIL3Q8TAT5 605 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 GRHL3Q8TE85 626 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 CHAC2Q8WUX2 184 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 DNAJA4Q8WW22 397 aaPredicted RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SPRYD4Q8WW59 207 aaPredicted RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ACOT12Q8WYK0 555 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 HPS1Q92902 700 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 NACC2Q96BF6 587 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 PEX11GQ96HA9 241 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 DIRAS2Q96HU8 199 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 VSTM2LQ96N03 204 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 FAM210AQ96ND0 272 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF285Q96NJ3 590 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SLC38A3Q99624 504 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 NDC1Q9BTX1 674 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF426Q9BUY5 554 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 KATNB1Q9BVA0 655 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 ALG8Q9BVK2 526 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SRRQ9GZT4 340 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 CAPN10Q9HC96 672 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 FBXO34Q9NWN3 711 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SOHLH2Q9NX45 425 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 QPCTLQ9NXS2 382 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 HCN3Q9P1Z3 774 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 IL20RAQ9UHF4 553 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 KLHL21Q9UJP4 597 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 SIGLEC7Q9Y286 467 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 MRPS17Q9Y2R5 130 aaKnown RBP6.65□□□□□ -1.35
SMAD1-202ENST00000394092 PCDHGB2Q9Y5G2 931 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 MTCH2Q9Y6C9 303 aa6.65□□□□□ -1.35
SMAD1-202ENST00000394092 CEP192Q8TEP8 1941 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 IGHV1OR15-9A0A0B4J2B8 117 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 A0A1W2PQL4 384 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 DAPL1A0PJW8 107 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 FABP12A6NFH5 140 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 SHISA7A6NL88 538 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 H3BQ06 376 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 J3QRE1 110 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 GABRPO00591 440 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 POLR1CO15160 346 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 SLC19A2O60779 497 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 TMCC2O75069 709 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 NDUFB2O95178 105 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 SLC2A10O95528 541 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 NTN1O95631 604 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 MSL3P1P0C860 447 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 PEPDP12955 493 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 S1PR1P21453 382 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 NOS3P29474 1203 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 TMED10P49755 219 aaKnown RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 EMDP50402 254 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 EPHA4P54764 986 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 MAZP56270 477 aaKnown RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 HNRNPKP61978 463 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 LGALS3BPQ08380 585 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 FUT7Q11130 342 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF267Q14586 743 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 KLHL12Q53G59 568 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 DESI1Q6ICB0 168 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 CCBE1Q6UXH8 406 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 GATAD2AQ86YP4 633 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 CARFQ8N187 725 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 ARL14Q8N4G2 192 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 ARIH2OSQ8N7S6 290 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF527Q8NB42 609 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 OR7G1Q8NGA0 311 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 OR13C2Q8NGS9 318 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 LMX1AQ8TE12 382 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 DOK4Q8TEW6 326 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 CNOT9Q92600 299 aaKnown RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 SDHCQ99643 169 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-202ENST00000394092 MAP3K3Q99759 626 aa6.64□□□□□ -1.35
SMAD1-202ENST00000394092 TM9SF2Q99805 663 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms