RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMEM41AQ96HV5 264 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 PTGES2Q9H7Z7 377 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 ANKRD10Q9NXR5 420 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 PCDHGA9Q9Y5G4 932 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 U3KQV3 271 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A087WV48 116 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ANKUB1A6NFN9 424 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 OIP5O43482 229 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 PEX1O43933 1283 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ADAM11O75078 769 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 NEURL1O76050 574 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ITPKBP27987 946 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 PEX2P28328 305 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 LIMS1P48059 325 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 MASP1P48740 699 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 RAPSNQ13702 412 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 OR1Q1Q15612 314 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 FGD3Q5JSP0 725 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 IGFL2Q6UWQ7 119 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF227Q86WZ6 799 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 PACRGLQ8N7B6 248 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 TMEM234Q8WY98 164 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ST8SIA1Q92185 356 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 TM9SF4Q92544 642 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC41A3Q96GZ6 507 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF597Q96LX8 424 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 SMAD5Q99717 465 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 CIB1Q99828 191 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 DMXL2Q8TDJ6 3036 aa13.25□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A0B4J2E0 115 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A1B0GWA3 101 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A1B0GX12 115 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CHP2O43745 196 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CDC40O60508 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 PNMTP11086 282 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC1A3P43003 542 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 IDH2P48735 452 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ARG2P78540 354 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ALG10BQ5I7T1 473 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 BORAQ6PGQ7 559 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 GDF7Q7Z4P5 450 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 TSPYL5Q86VY4 417 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 PLCZ1Q86YW0 608 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 FADS6Q8N9I5 356 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 MDS2Q8NDY4 140 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 OR4C15Q8NGM1 316 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SNRNP27Q8WVK2 155 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC38A4Q969I6 547 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 C5orf34Q96MH7 638 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 PSD2Q9BQI7 771 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 MAN2C1Q9NTJ4 1040 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 RHCGQ9UBD6 479 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC7A7Q9UM01 511 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 KLF13Q9Y2Y9 288 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 PCDHGB6Q9Y5F9 930 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SAC3D1A6NKF1 404 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 FAM47E-STBD1D6RA91 191 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SNPHO15079 494 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 TRIM3O75382 744 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CD46P15529 392 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CNR1P21554 472 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 VHLP40337 213 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 HTR3AP46098 478 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF41P51814 821 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 IST1P53990 364 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 MICAQ29983 383 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 DCST1Q5T197 706 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 TIGD3Q6B0B8 471 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ZBTB49Q6ZSB9 765 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 STK32CQ86UX6 486 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CADM2Q8N3J6 435 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 OR4K17Q8NGC6 315 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF563Q8TA94 476 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC7A13Q8TCU3 470 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 GPR119Q8TDV5 335 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 ZCCHC14Q8WYQ9 949 aaKnown RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 SIGLEC12Q96PQ1 595 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 FAM173AQ9BQD7 235 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 BOKQ9UMX3 212 aaPredicted RBP13.24□□□□□ -0.29
NIPAL3-202ENST00000339255 A0A087WZY1 265 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 RASAL1O95294 804 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 GP1BBP13224 206 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 ST13P50502 369 aaKnown RBP13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 QPRTQ15274 297 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 SPINK14Q6IE38 97 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 WDSUB1Q8N9V3 476 aa13.23□□□□□ -0.29
NIPAL3-202ENST00000339255 OR2M3Q8NG83 312 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms