RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 OCM2P0CE71 109 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 OCMP0CE72 109 aaPredicted RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 HK1P19367 917 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 SLC1A3P43003 542 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 PGDP52209 483 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 ZNF181Q2M3W8 571 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 ZC3H14Q6PJT7 736 aaKnown RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 HSDL2Q6YN16 418 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 C11orf74Q86VG3 221 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 CPOQ8IVL8 374 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 SLC25A45Q8N413 288 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 OR4C6Q8NH72 309 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 PTPMT1Q8WUK0 201 aaPredicted RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 CDX2Q99626 313 aaPredicted RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 DUSP23Q9BVJ7 150 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
VAMP2-201ENST00000316509 CAB39Q9Y376 341 aaPredicted RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 TMEM184BQ9Y519 407 aaPredicted RBP12.84□□□□□ -0.35
VAMP2-201ENST00000316509 J3QRE1 110 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 HRKO00198 91 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 CH25HO95992 272 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 IFNGP01579 166 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 SAGP10523 405 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 PAICSP22234 425 aaKnown RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 FGF9P31371 208 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 SOX3P41225 446 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 RFX3P48380 749 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 SLC37A1P57057 533 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 FOXK2Q01167 660 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ELAVL1Q15717 326 aaKnown RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 TMPRSS11AQ6ZMR5 421 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ZNF304Q9HCX3 659 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 EXOSC4Q9NPD3 245 aaKnown RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 MEPEQ9NQ76 525 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 C20orf141Q9NUB4 165 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 SPIN1Q9Y657 262 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 A0A087WUJ7 227 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 FRG2CA6NGY1 282 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 RIIAD1A6NNX1 92 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 AKAP8O43823 692 aaKnown RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 PEPDP12955 493 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 GABRA5P31644 462 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 RNF144AP50876 292 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 FXYD6P3P58550 94 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ZP2Q05996 745 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 OXA1LQ15070 435 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 PAQR6Q6TCH4 344 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 OAFQ86UD1 273 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 FAM71CQ8NEG0 241 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 IFT27Q9BW83 186 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 C6orf62Q9GZU0 229 aaPredicted RBP12.83□□□□□ -0.36
VAMP2-201ENST00000316509 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 KLHL21Q9UJP4 597 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 DTX4Q9Y2E6 619 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
VAMP2-201ENST00000316509 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 GIMD1P0DJR0 217 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 PNMTP11086 282 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 FOSL2P15408 326 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 CD53P19397 219 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 FBLP22087 321 aaKnown RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ALAS2P22557 587 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 RPS3AP61247 264 aaKnown RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 POU4F2Q12837 409 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 KRR1Q13601 381 aaKnown RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 TRIM16LQ309B1 348 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 LIPKQ5VXJ0 399 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ARHGAP11AQ6P4F7 1023 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 CD200R1LQ6Q8B3 271 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 OR1L3Q8NH93 324 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 GRHL3Q8TE85 626 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 DAZLQ92904 295 aaKnown RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 SGTBQ96EQ0 304 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 LCORQ96JN0 433 aaPredicted RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ZNF768Q9H5H4 540 aaKnown RBP12.82□□□□□ -0.36
VAMP2-201ENST00000316509 C12orf10Q9HB07 376 aa12.82□□□□□ -0.36
VAMP2-201ENST00000316509 ASB6Q9NWX5 421 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms