RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.5
HIF3A-204ENST00000300862 RFPL3O75679 317 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 ALAS2P22557 587 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 HLA-DMAP28067 261 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 OR3A3P47888 321 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 SNRPD2P62316 118 aaKnown RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 PLAURQ03405 335 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 QPRTQ15274 297 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 CCDC85BQ15834 202 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TATDN3Q17R31 274 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 IDNKQ5T6J7 187 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 FHL5Q5TD97 284 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 NIPAL3Q6P499 406 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 ARL9Q6T311 187 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 FAM109AQ8N4B1 249 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 ACBD7Q8N6N7 88 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 C19orf18Q8NEA5 215 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 OR52N1Q8NH53 320 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 DNAJA4Q8WW22 397 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 PTP4A1Q93096 173 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 SLC22A18Q96BI1 424 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 HS6ST2Q96MM7 605 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 IFT27Q9BW83 186 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 MED17Q9NVC6 651 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 C19orf53Q9UNZ5 99 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 GTPBP1O00178 669 aaKnown RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 BHLHE40O14503 412 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 CHST10O43529 356 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 AGR2O95994 175 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 NID1P14543 1247 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 BMP7P18075 431 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 NDUFS1P28331 727 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TNFRSF4P43489 277 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 EVX1P49640 407 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TNK1Q13470 666 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 KIR2DS3Q14952 304 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 WDR45BQ5MNZ6 344 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 DGAT2L6Q6ZPD8 337 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 SIX5Q8N196 739 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TTC9Q92623 222 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 PTCHD1Q96NR3 888 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 TCEAL2Q9H3H9 227 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-204ENST00000300862 KLHL21Q9UJP4 597 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 ALG5Q9Y673 324 aa11.95□□□□□ -0.5
HIF3A-204ENST00000300862 FANCMQ8IYD8 2048 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 CDHR4A6H8M9 788 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 J3QRE1 110 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 GNB5O14775 395 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 RNF13O43567 381 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 ADAM11O75078 769 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 LYPD3O95274 346 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 IL9P15248 144 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SHC1P29353 583 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SLC3A1Q07837 685 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 ALG11Q2TAA5 492 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 BTBD16Q32M84 506 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 EIPR1Q53HC9 387 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 LAMTOR1Q6IAA8 161 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SLC37A3Q8NCC5 494 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 DEDD2Q8WXF8 326 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 RERGQ96A58 199 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 ELSPBP1Q96BH3 223 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 BPIFA2Q96DR5 249 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 GABRG3Q99928 467 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 ZFYVE21Q9BQ24 234 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SLC7A5P2Q9GIP4 190 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 MEPEQ9NQ76 525 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 BABAM2Q9NXR7 383 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 NLKQ9UBE8 527 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 LAMA1P25391 3075 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 A6NCN8 305 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SMLR1H3BR10 107 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 SGK494L7N484 410 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 MAGEB4O15481 346 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 DBIP07108 87 aaKnown RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 THBS1P07996 1170 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 RAB25P57735 213 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 OR10A3P58181 314 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 E2F1Q01094 437 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 FOXK2Q01167 660 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 ABHD13Q7L211 337 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 PLCZ1Q86YW0 608 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 CCDC28AQ8IWP9 274 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 BRIX1Q8TDN6 353 aaKnown RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 KISS1RQ969F8 398 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-204ENST00000300862 FAM131CQ96AQ9 280 aa11.94□□□□□ -0.5
HIF3A-204ENST00000300862 MRGPRX1Q96LB2 322 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms