RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 AMIGO3Q86WK7 504 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 MEGF10Q96KG7 1140 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CACNG4Q9UBN1 327 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ADGRB2O60241 1585 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CADP27708 2225 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PLSCR1O15162 318 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DNAJB6O75190 326 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 LMO2P25791 158 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 RPS18P62269 152 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TAF9Q16594 264 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 RELL2Q8NC24 303 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 RHBDD3Q9Y3P4 386 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 NCOR1O75376 2440 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TFAP2AP05549 437 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 MTHFD2P13995 350 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 GGHQ92820 318 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DVL3Q92997 716 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TSGA13Q96PP4 275 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 YJEFN3A6XGL0 299 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DVL1O14640 695 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PTHP01270 115 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 SERPINA5P05154 406 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PTPN2P17706 415 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DVL1P1P54792 670 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ADARB1P78563 741 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PIN1Q13526 163 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TBCEQ15813 527 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 OR4F15Q8NGB8 312 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 OR4K5Q8NGD3 323 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PDZD7Q9H5P4 517 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 IGFLR1Q9H665 355 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 KDELR2P33947 212 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 OR4D1Q15615 310 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 AMZ1Q400G9 498 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CD276Q5ZPR3 534 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 B3GLCTQ6Y288 498 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 ZDHHC3Q9NYG2 299 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 PFKMP08237 780 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 TYRP14679 529 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 H3F3AP84243 136 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 FAM180BQ6P0A1 224 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 CELF5Q8N6W0 485 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 NUS1Q96E22 293 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 SYT3Q9BQG1 590 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
SHROOM3-201ENST00000296043 C7orf72A4D263 438 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 GABRA3P34903 492 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 FAM209AQ5JX71 171 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 OR6V1Q8N148 313 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 BPIFB2Q8N4F0 458 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 MAGEH1Q9H213 219 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 VAPAQ9P0L0 249 aa11.08□□□□□ -0.63
SHROOM3-201ENST00000296043 ANKRD61A6NGH8 418 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SCAPQ12770 1279 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 BTG3Q14201 252 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM31Q5JXX7 168 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 C4orf36Q96KX1 117 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 C11orf84Q9BUA3 381 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SDHAF3Q9NRP4 125 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 OLAHQ9NV23 265 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 ADAM23O75077 832 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 AOC2O75106 756 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 HBE1P02100 147 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 CLEC2LP0C7M8 214 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 KCNQ2O43526 872 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 KITLGP21583 273 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 ELLP55199 621 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 A0A087WV62 115 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 M0QYG6 137 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 C18orf21Q32NC0 220 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 TECRLQ5HYJ1 363 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 ERN2Q76MJ5 926 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 PLA2G15Q8NCC3 412 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SIGLEC10Q96LC7 697 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 DCAF16Q9NXF7 216 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC23A1Q9UHI7 598 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 BRAT1Q6PJG6 821 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 SGK3Q96BR1 496 aa11.08□□□□□ -0.64
SHROOM3-201ENST00000296043 RBP7Q96R05 134 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms