RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TMEM225BP0DP42 221 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 EPHA1P21709 976 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DRD5P21918 477 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 NFYAP23511 347 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 IMPA1P29218 277 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF136P52737 540 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PRKCZQ05513 592 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PTPRCAPQ14761 206 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ISCA2Q86U28 154 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF546Q86UE3 836 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 KLHDC8AQ8IYD2 350 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SPARTQ8N0X7 666 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C1QTNF2Q9BXJ5 285 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DEFB126Q9BYW3 111 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CNTNAP3Q9BZ76 1288 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF160Q9HCG1 818 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 B4GALT6Q9UBX8 382 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DVL2O14641 736 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ADAM23O75077 832 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 KNG1P01042 644 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 P04436 131 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C5AR1P21730 350 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 HMGCLP35914 325 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 RNF144AP50876 292 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 BATFQ16520 125 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DUSP7Q16829 419 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 APOOLQ6UXV4 268 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C12orf45Q8N5I9 185 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DTX3Q8N9I9 347 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SLAMF9Q96A28 289 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 UHRF1Q96T88 793 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ST6GALNAC5Q9BVH7 336 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PAPOLGQ9BWT3 736 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SLC12A9Q9BXP2 914 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 RNF39Q9H2S5 420 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CLMPQ9H6B4 373 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 WDR6Q9NNW5 1121 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CNIH4Q9P003 139 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TESQ9UGI8 421 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 COL24A1Q17RW2 1714 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FRMPD3Q5JV73 1810 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TCRBV21S2A2A0A5A6 115 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LRIT2A6NDA9 550 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 KIAA0355O15063 1070 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FGF18O76093 207 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 PTBP1P26599 531 aaKnown RBP eCLIP4.52□□□□□ -1.692e-7■■■■■ 32.1
RC3H1-201ENST00000258349 CTXN1P60606 82 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ADARB1P78563 741 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TCTE1Q5JU00 501 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CPOQ8IVL8 374 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 HORMAD2Q8N7B1 307 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FRZBQ92765 325 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MR1Q95460 341 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 C4orf36Q96KX1 117 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LMF2Q9BU23 707 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 BCAS3Q9H6U6 928 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 NOX3Q9HBY0 568 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 THSD1Q9NS62 852 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TNFRSF10AO00220 468 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 LILRB3O75022 631 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 GPR32O75388 356 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 HLA-HP01893 362 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 POU3F4P49335 361 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 UBE2NP61088 152 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TLE4Q04727 773 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SLC10A2Q12908 348 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SFRP4Q6FHJ7 346 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 TTLL10Q6ZVT0 673 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MEPCEQ7L2J0 689 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SMIM15Q7Z3B0 74 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 NPWQ8N729 165 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 MED30Q96HR3 178 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FBRSL1Q9HCM7 1045 aaKnown RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 RANGRFQ9HD47 186 aaPredicted RBP4.52□□□□□ -1.69
RC3H1-201ENST00000258349 QPCTLQ9NXS2 382 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 WNT6Q9Y6F9 365 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF860A6NHJ4 632 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FAM72CH0Y354 149 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FZD7O75084 574 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 WDPCPO95876 746 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SERPINA5P05154 406 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 GPX3P22352 226 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 GATMP50440 423 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CASP6P55212 293 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FXYD4P59646 89 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 POU4F3Q15319 338 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FAM72AQ5TYM5 149 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FAM72DQ6L9T8 149 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 DEFB132Q7Z7B7 95 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 FAM72BQ86X60 149 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ADGRG5Q8IZF4 528 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 SLC43A2Q8N370 569 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 OR5T1Q8NG75 326 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 OR4D6Q8NGJ1 314 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 CREB3L4Q8TEY5 395 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 GSTO2Q9H4Y5 243 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF705FA8MVS1 300 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms