RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 C12orf10Q9HB07 376 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 V9GYS6 101 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 LOC730098B7Z3J9 87 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 DVL2O14641 736 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 KIAA1024LP59773 190 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 IER5LQ5T953 404 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 REEP3Q6NUK4 255 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 PRSS48Q7RTY5 328 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 HOXB13Q92826 284 aaPredicted RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 OR52A5Q9H2C5 316 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 MEGF6O75095 1541 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NPIPA5A0A0B4J1W7 369 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 FANCGO15287 622 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ATG12O94817 140 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NPAS3Q8IXF0 933 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SLC35F3Q8IY50 421 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 RNF128Q8TEB7 428 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 CMTM7Q96FZ5 175 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NGBQ9NPG2 151 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 FETUBQ9UGM5 382 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 KDELR3O43731 214 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 HPRP00739 348 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 OLIG2Q13516 323 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 TPGS2Q68CL5 300 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 CREB3L4Q8TEY5 395 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 UHRF2Q96PU4 802 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SNX18Q96RF0 628 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NTMT1Q9BV86 223 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 CEMIPQ8WUJ3 1361 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 E9PCH4 1651 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 RNF212BA8MTL3 300 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 HAS3O00219 553 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 AQP9O43315 295 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 RDH16O75452 317 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SNRNP200O75643 2136 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 PKLRP30613 574 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 BCL6P41182 706 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 MRPS10P82664 201 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 GLO1Q04760 184 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 APOFQ13790 326 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 GPR176Q14439 515 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 DHCR24Q15392 516 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 LRRC57Q8N9N7 239 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 OR4K14Q8NGD5 310 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SLC2A12Q8TD20 617 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 TMEM234Q8WY98 164 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 BABAM2Q9NXR7 383 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 RHBDD3Q9Y3P4 386 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 ABCA6Q8N139 1617 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 GJE1A6NN92 205 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 CD300LBA8K4G0 201 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 FABP7O15540 132 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 H3F3CQ6NXT2 135 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SYNPRQ8TBG9 265 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 BRIX1Q8TDN6 353 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 DAZLQ92904 295 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 LIN7CQ9NUP9 197 aaKnown RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 I6L893 689 aaPredicted RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 KLK10O43240 276 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 TMEM63AO94886 807 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SERPINE2P07093 398 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 ZNF43P17038 809 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 GCGRP47871 477 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SHC2P98077 582 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 ARHGAP1Q07960 439 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 FAM69AQ5T7M9 428 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 PRAMEF8Q5VWM4 474 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 PRAMEF7Q5VXH5 474 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 PLCXD3Q63HM9 321 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 OR56B4Q8NH76 319 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 SLC35F5Q8WV83 523 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 C22orf15Q8WYQ4 148 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 FAM212BQ9NTI7 297 aaPredicted RBP10.46□□□□□ -0.73
MSH6-201ENST00000234420 FBXO7Q9Y3I1 522 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 POMT1Q9Y6A1 747 aa10.46□□□□□ -0.73
MSH6-201ENST00000234420 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 PIGBOS1A0A0B4J2F0 54 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ZNF217O75362 1048 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 HLA-DOBP13765 273 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 KITLGP21583 273 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 GTF2BQ00403 316 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 AKR1C1Q04828 323 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ARHGAP19Q14CB8 494 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 PRAMEF20Q5VT98 475 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 TRILQ7L0X0 811 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ZADH2Q8N4Q0 377 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 FCRL1Q96LA6 429 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ARRDC1-AS1Q9H2J1 176 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ZDHHC18Q9NUE0 388 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ENPP5Q9UJA9 477 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 KCPQ6ZWJ8 1503 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 KIF13AQ9H1H9 1805 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 TMEM225BP0DP42 221 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms