RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MYL9P24844 172 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 APEX1P27695 318 aaKnown RBP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 HLA-DMAP28067 261 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 LBX1P52954 281 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 HBMQ6B0K9 141 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 ARMC6Q6NXE6 501 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 THSD4Q6ZMP0 1018 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 TPRA1Q86W33 373 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 LSMEM1Q8N8F7 131 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 OR13H1Q8NG92 308 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 OR5W2Q8NH69 310 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 DOK4Q8TEW6 326 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 TMEM43Q9BTV4 400 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 MMP28Q9H239 520 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 MED20Q9H944 212 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC28A3Q9HAS3 691 aa20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 MEPEQ9NQ76 525 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-201ENST00000225742 SGK494L7N484 410 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 PLPP2O43688 288 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 GSTT2P0CG29 244 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 GSTT2BP0CG30 244 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 FUT1P19526 365 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 PSMD4P55036 377 aaKnown RBP20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 SKP1P63208 163 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 PLAURQ03405 335 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 ZFP69Q49AA0 526 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 KLHL12Q53G59 568 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 ARHGAP11AQ6P4F7 1023 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF550Q7Z398 422 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 DUSP18Q8NEJ0 188 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 OR10H4Q8NGA5 316 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC37A2Q8TED4 501 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 PATE1Q8WXA2 126 aa20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 CNOT9Q92600 299 aaKnown RBP20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 RBFOX1Q9NWB1 397 aaKnown RBP20.31■□□□□ 0.84
SMARCD2-201ENST00000225742 C2orf92A0A1B0GVN3 265 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 A0A1B0GWA3 101 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 TCRBV21S2A2A0A5A6 115 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 FAM172BPA6NC97 362 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 TRIM3O75382 744 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SBK2P0C263 348 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 PEPDP12955 493 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 GABRG2P18507 467 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 PTNP21246 168 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 MLLT3P42568 568 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 KIR2DL3P43628 341 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 IL18Q14116 193 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SF3A2Q15428 464 aaKnown RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 RPLP0P6Q8NHW5 317 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SENP5Q96HI0 755 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 HCAR1Q9BXC0 346 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 FOLH1BQ9HBA9 442 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 POMT2Q9UKY4 750 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 CENPXA8MT69 81 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 NCR1O76036 304 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 S1PR1P21453 382 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 NKX2-5P52952 324 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 RPS7P62081 194 aaKnown RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 IFITM2Q01629 132 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF141Q15928 474 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 TBRG1Q3YBR2 411 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 CMIPQ8IY22 773 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 TEX19Q8NA77 164 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 ADAMTS18Q8TE60 1221 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 CAPSLQ8WWF8 208 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC7A6Q92536 515 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 TP63Q9H3D4 680 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 DNAJB12Q9NXW2 375 aaKnown RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 FLRT3Q9NZU0 649 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SERTAD3Q9UJW9 196 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 MMP17Q9ULZ9 603 aa20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 SIRT4Q9Y6E7 314 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-201ENST00000225742 ARHGEF17Q96PE2 2063 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 TTC36A6NLP5 189 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 TFECO14948 347 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 RDH16O75452 317 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 ACAA2P42765 397 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 ZNF362Q5T0B9 420 aaPredicted RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 PLET1Q6UQ28 207 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 LINC00114Q6XXX2 140 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 OAFQ86UD1 273 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 SLC22A18ASQ8N1D0 253 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 ARHGEF39Q8N4T4 335 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 ADGRL4Q9HBW9 690 aa20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 DDX28Q9NUL7 540 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 USP36Q9P275 1121 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-201ENST00000225742 ZC3H12DA2A288 527 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 A8MU76 341 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 SSTR4P31391 388 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 PSG6Q00889 435 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 EIF2B5Q13144 721 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 CCDC92Q53HC0 331 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 KIAA0895LQ68EN5 471 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 B3GLCTQ6Y288 498 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 TAF8Q7Z7C8 310 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 ZAR1Q86SH2 424 aa20.28■□□□□ 0.84
SMARCD2-201ENST00000225742 LRRC28Q86X40 367 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms