RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 VN1R1Q9GZP7 353 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 HHATLQ9HCP6 504 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 MEPEQ9NQ76 525 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 MKL2Q9ULH7 1088 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 MED31Q9Y3C7 131 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SURF4O15260 269 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 RFPL3O75679 317 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 RORAP35398 523 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 ELAVL1Q15717 326 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 YOD1Q5VVQ6 348 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 SHISA6Q6ZSJ9 500 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 CLDN22Q8N7P3 220 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR52I1Q8NGK6 324 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 FANK1Q8TC84 345 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 BPIFA2Q96DR5 249 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 LGALS12Q96DT0 336 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 NUDT9Q9BW91 350 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRRG3Q9BZD7 231 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR52D1Q9H346 318 aa15.97■□□□□ 0.15
PCDHGC3-205ENST00000617641 EFCAB9A8MZ26 197 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 POLR1CO15160 346 aaPredicted RBP15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 AIREO43918 545 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 APOL3O95236 402 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC2A10O95528 541 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 GRK5P34947 590 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 PPICP45877 212 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 SQSTM1Q13501 440 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 ALG10BQ5I7T1 473 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 PAQR6Q6TCH4 344 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 KIRREL2Q6UWL6 708 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 ZNF550Q7Z398 422 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 GATSQ8NAP1 163 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 ANKK1Q8NFD2 765 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR2T33Q8NG76 320 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 GAL3ST4Q96RP7 486 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 MGLLQ99685 303 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC7A5P2Q9GIP4 190 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 ENKD1Q9H0I2 346 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 UBQLN3Q9H347 655 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 SLC22A11Q9NSA0 550 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 FRYLO94915 3013 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 M0R3G1 203 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 PRODHO43272 600 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 CLPXO76031 633 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 NGFRP08138 427 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 RGS6P49758 472 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 COX15Q7KZN9 410 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 CMIPQ8IY22 773 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 CYP4Z2PQ8N1L4 340 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 LSMEM1Q8N8F7 131 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 FAM181AQ8N9Y4 354 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR13C2Q8NGS9 318 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 BRIX1Q8TDN6 353 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 PLEKHA8Q96JA3 519 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 HS6ST2Q96MM7 605 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 OR6C1Q96RD1 312 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 MKKSQ9NPJ1 570 aaPredicted RBP15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 ERGIC3Q9Y282 383 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 LSM2Q9Y333 95 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 TECTAO75443 2155 aa15.96■□□□□ 0.15
PCDHGC3-205ENST00000617641 IGHV5-10-1A0A0J9YXX1 117 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 KDM4EB2RXH2 506 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 GNB5O14775 395 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TIAF1O95411 115 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 CLK1P49759 484 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 DCTN2Q13561 401 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TSTQ16762 297 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 KLHL26Q53HC5 615 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 FAAH2Q6GMR7 532 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 RHBDD2Q6NTF9 364 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 LANCL3Q6ZV70 420 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TMPRSS11FQ6ZWK6 438 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 PRR22Q8IZ63 422 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 CDK20Q8IZL9 346 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLC38A9Q8NBW4 561 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 OR4D9Q8NGE8 314 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 ADIPOR1Q96A54 375 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TEX12Q9BXU0 123 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 NRSN2Q9GZP1 204 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 LRRN3Q9H3W5 708 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 SRPK3Q9UPE1 567 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TMEM5Q9Y2B1 443 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 CSO75390 466 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 IL33O95760 270 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 ANKRD34CP0C6C1 535 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 SAGP10523 405 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 TBXA2RP21731 343 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 GAS1P54826 345 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 ACY1Q03154 408 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 ZSWIM7Q19AV6 140 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 BMP8AQ7Z5Y6 402 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLCO6A1Q86UG4 719 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 AMER2Q8N7J2 671 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLC35B4Q969S0 331 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 RNFT2Q96EX2 444 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 LCORQ96JN0 433 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 CCDC74BQ96LY2 380 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 ZNF426Q9BUY5 554 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 OR51E2Q9H255 320 aa15.95■□□□□ 0.14
PCDHGC3-205ENST00000617641 RPS6KB2Q9UBS0 482 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms