RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ACAA2P42765 397 aaKnown RBP20.39■□□□□ 0.85
ATG4D-209ENST00000588857 TAF11Q15544 211 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 OR1Q1Q15612 314 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 NTRK2Q16620 822 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 TBC1D25Q3MII6 688 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 JMJD6Q6NYC1 403 aaPredicted RBP20.39■□□□□ 0.85
ATG4D-209ENST00000588857 NODALQ96S42 347 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 ANKRD19PQ9H560 264 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 EXOSC3Q9NQT5 275 aaKnown RBP20.39■□□□□ 0.85
ATG4D-209ENST00000588857 MAN2C1Q9NTJ4 1040 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 CARD8Q9Y2G2 431 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 CELSR3Q9NYQ7 3312 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 FAAHO00519 579 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 TP53I11O14683 189 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ANGPTL1O95841 491 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 UQCRBP14927 111 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 COPZ1P61923 177 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 SKP2Q13309 424 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF791Q3KP31 576 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 H3F3CQ6NXT2 135 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 GDF7Q7Z4P5 450 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 DND1Q8IYX4 353 aaKnown RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 TMEM156Q8N614 296 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 SLC7A13Q8TCU3 470 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 GRHL3Q8TE85 626 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 SLC38A4Q969I6 547 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 THOC3Q96J01 351 aaKnown RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 LAT2Q9GZY6 243 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ATP13A2Q9NQ11 1180 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 KMT2BQ9UMN6 2715 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 HCRTR2O43614 444 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 MAN1A2O60476 641 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 EIF4E2O60573 245 aaKnown RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 OR6B1O95007 311 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 LINGO3P0C6S8 592 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 THRBP10828 461 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ANXA8P13928 327 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 CCR4P51679 360 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 EPS8Q12929 822 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 AIMP2Q13155 320 aaKnown RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 PODNL1Q6PEZ8 512 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF613Q6PF04 617 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 MISPQ8IVT2 679 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 LINC00471Q8N535 108 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 SIRT6Q8N6T7 355 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 TOR1AIP2Q8NFQ8 470 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 OR10G3Q8NGC4 313 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 BRIX1Q8TDN6 353 aaKnown RBP20.38■□□□□ 0.85
ATG4D-209ENST00000588857 FEVQ99581 238 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 OSBPL11Q9BXB4 747 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 RTN4RQ9BZR6 473 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 RPS6KB2Q9UBS0 482 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 SLC7A7Q9UM01 511 aa20.38■□□□□ 0.85
ATG4D-209ENST00000588857 ACACAQ13085 2346 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 LAMA5O15230 3695 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 ARRDC5A6NEK1 342 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 IGFBP5P24593 272 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 RPP38P78345 283 aaKnown RBP20.37■□□□□ 0.85
ATG4D-209ENST00000588857 ANKRD34AQ69YU3 496 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 FAHD1Q6P587 224 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 IL20RBQ6UXL0 311 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 CADM2Q8N3J6 435 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 LSMEM1Q8N8F7 131 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 CLEC1AQ8NC01 280 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 RNF217Q8TC41 542 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 FGF11Q92914 225 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 ARSGQ96EG1 525 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 SH3YL1Q96HL8 342 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-209ENST00000588857 RDH12Q96NR8 316 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 FUZQ9BT04 418 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 Q9H521 79 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 METTL7AQ9H8H3 244 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF556Q9HAH1 456 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 KLRF1Q9NZS2 232 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 RAB26Q9ULW5 256 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 ZZEF1O43149 2961 aa20.37■□□□□ 0.85
ATG4D-209ENST00000588857 SH3PXD2BA1X283 911 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 OIP5O43482 229 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 TLX3O43711 291 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-209ENST00000588857 OR10H3O60404 316 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 ADAM11O75078 769 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 ACADSP16219 412 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 SLC6A8P48029 635 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 DAPP51397 102 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 RAD23AP54725 363 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 ZNF117Q03924 483 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 SEC23BQ15437 767 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 MEP1AQ16819 746 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 RFX4Q33E94 735 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 ACER2Q5QJU3 275 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 KDM4DQ6B0I6 523 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 CBLN3Q6UW01 205 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 RRM2BQ7LG56 351 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 OR9Q2Q8NGE9 314 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 THAP4Q8WY91 577 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 PSD2Q9BQI7 771 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 KRT84Q9NSB2 600 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 SELENONQ9NZV5 590 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 TEKT2Q9UIF3 430 aa20.36■□□□□ 0.85
ATG4D-209ENST00000588857 DLGAP1O14490 977 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms