RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RNF223E7ERA6 249 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 OIP5O43482 229 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CPA3P15088 417 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 EFNA1P20827 205 aaPredicted RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 IL32P24001 234 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CCT5P48643 541 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 P2RX1P51575 399 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 LASP1Q14847 261 aaKnown RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 P2RY6Q15077 328 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 TSC22D1Q15714 1073 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 ZNF672Q499Z4 452 aaPredicted RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 KLHL26Q53HC5 615 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 KANK2Q63ZY3 851 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CDC73Q6P1J9 531 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CBLN3Q6UW01 205 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 DNAJC14Q6Y2X3 702 aaPredicted RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 DNM1P46Q6ZS02 220 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 R3HCC1LQ7Z5L2 792 aaKnown RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 TUSC5Q8IXB3 177 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 BANPQ8N9N5 519 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 ZNF527Q8NB42 609 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 PSMA8Q8TAA3 256 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 ZFP90Q8TF47 636 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 HSD17B8Q92506 261 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 CDS1Q92903 461 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 KISS1RQ969F8 398 aaPredicted RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 TRMOQ9BU70 441 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 POTEKPQ9BYX7 375 aa11.63□□□□□ -0.55
TPM1-220ENST00000559556 C12orf65Q9H3J6 166 aaKnown RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 ZCCHC3Q9NUD5 404 aaKnown RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 MAGED1Q9Y5V3 778 aaPredicted RBP11.63□□□□□ -0.55
TPM1-220ENST00000559556 NPIPB9F8W1W9 429 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 SCAMP2O15127 329 aaKnown RBP11.62□□□□□ -0.55
TPM1-220ENST00000559556 CLOCKO15516 846 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 PRKD3O94806 890 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 NTN1O95631 604 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 NUDT14O95848 222 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 CHEK2O96017 543 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 YES1P07947 543 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 BCKDHAP12694 445 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 PRKCAP17252 672 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
TPM1-220ENST00000559556 IDUAP35475 653 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 HPCAL1P37235 193 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 CDKN1AP38936 164 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 SELENBP1Q13228 472 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 ITGADQ13349 1161 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 PCLAFQ15004 111 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 SLC25A53Q5H9E4 307 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM1-220ENST00000559556 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 LRIG3Q6UXM1 1119 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 Q6ZT83 130 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 ATG4DQ86TL0 474 aaPredicted RBP11.62□□□□□ -0.55
TPM1-220ENST00000559556 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 MAPK1IP1LQ8NDC0 245 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 KBTBD8Q8NFY9 601 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 FBXO27Q8NI29 283 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 PIWIL2Q8TC59 973 aaKnown RBP11.62□□□□□ -0.55
TPM1-220ENST00000559556 GPR119Q8TDV5 335 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
TPM1-220ENST00000559556 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 REG4Q9BYZ8 158 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 TRIM2Q9C040 744 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 HOXD1Q9GZZ0 328 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 SLCO5A1Q9H2Y9 848 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 L2HGDHQ9H9P8 463 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 BCO1Q9HAY6 547 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 ATP6V1HQ9UI12 483 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 FIS1Q9Y3D6 152 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 DNAJC15Q9Y5T4 150 aa11.62□□□□□ -0.55
TPM1-220ENST00000559556 NPIPA5A0A0B4J1W7 369 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 A0A1W2PP18 115 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ESPNB1AK53 854 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ZNF814B7Z6K7 855 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 NPIPA7E9PJI5 369 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 H3BNH8 94 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ETV2O00321 342 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 COPEO14579 308 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ZNF195O14628 629 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ADAP00813 363 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 IGHV4-39P01824 125 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 LINC00032P0C843 101 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 NPIPA8P0DM63 369 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ATP6V1C1P21283 382 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 ACVR1BP36896 505 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 OR3A2P47893 321 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 TOMM34Q15785 309 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 PGGHGQ32M88 737 aa11.61□□□□□ -0.55
TPM1-220ENST00000559556 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
TPM1-220ENST00000559556 DCST2Q5T1A1 773 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms