RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TAS2R10Q9NYW0 307 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 CARD8Q9Y2G2 431 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 IFT52Q9Y366 437 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 ASH1LQ9NR48 2969 aaKnown RBP13.12□□□□□ -0.31
CPSF1-206ENST00000531480 CLDN24A6NM45 220 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 FAM220BPB1ANY3 271 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 LINC01387J3KSC0 135 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 FAAHO00519 579 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 HCRTR2O43614 444 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 SLC19A2O60779 497 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 TRAPPC6AO75865 159 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 NTN1O95631 604 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ACTL6AO96019 429 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 CSTAP01040 98 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 PABPC4LP0CB38 370 aaKnown RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF17P17021 662 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 GNLYP22749 145 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 RBPJQ06330 500 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 DMTNQ08495 405 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 CYP51A1Q16850 503 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 SLC25A53Q5H9E4 307 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 EMC4Q5J8M3 183 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 WIPI1Q5MNZ9 446 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ERICH5Q6P6B1 374 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 OR5W2Q8NH69 310 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ZBTB8AQ96BR9 441 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF524Q96C55 264 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ECSITQ9BQ95 431 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 MED17Q9NVC6 651 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 DNAJB12Q9NXW2 375 aaKnown RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 PRPF19Q9UMS4 504 aaKnown RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ANGPT4Q9Y264 503 aa13.11□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-206ENST00000531480 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 NME4O00746 187 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 BCKDKO14874 412 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CDC40O60508 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 ADAM11O75078 769 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 PDE9AO76083 593 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 IL7RP16871 459 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 BMP7P18075 431 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 ADH6P28332 368 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 PTGS2P35354 604 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CPOXP36551 454 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CRYBA2P53672 197 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 NDUFAF6Q330K2 333 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 DHRS4L2Q6PKH6 230 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF836Q6ZNA1 936 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 YRDCQ86U90 279 aaKnown RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 IFNEQ86WN2 208 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CLEC18CQ8NCF0 446 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 OR14L1PQ8NHC6 308 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 CNOT9Q92600 299 aaKnown RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 RELTQ969Z4 430 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 SH3YL1Q96HL8 342 aaPredicted RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 TIMP4Q99727 224 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 PRDM14Q9GZV8 571 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 TMEM181Q9P2C4 612 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 DKKL1Q9UK85 242 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
CPSF1-206ENST00000531480 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
CPSF1-206ENST00000531480 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CIB2O75838 187 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 MFN2O95140 757 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 EPPINO95925 133 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 UBTFL6P0CB48 400 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CPN1P15169 458 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 HK1P19367 917 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CA7P43166 264 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CPA2P48052 419 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 LHX2P50458 406 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 SLC7A2P52569 658 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 EEFSECP57772 596 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 PSME3P61289 254 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 CBFBQ13951 182 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
CPSF1-206ENST00000531480 BCL2A1Q16548 175 aa13.09□□□□□ -0.31
CPSF1-206ENST00000531480 FXNQ16595 210 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms