RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-210ENST00000527027 C1orf109Q9NX04 203 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 DCDC2Q9UHG0 476 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
PTPRU-210ENST00000527027 CR1P17927 2039 aa14.27□□□□□ -0.12
PTPRU-210ENST00000527027 AKAP10O43572 662 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 SSX4O60224 188 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 GPRIN2O60269 458 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 NUDT14O95848 222 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 ABHD2P08910 425 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 UROSP10746 265 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 MYL2P10916 166 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 PYGBP11216 843 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 ENPP1P22413 925 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 POU6F2P78424 691 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF117Q03924 483 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 NRF1Q16656 503 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 LRIG3Q6UXM1 1119 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 ZYG11AQ6WRX3 759 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 FRMD7Q6ZUT3 714 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 PHOSPHO1Q8TCT1 267 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 BCO1Q9HAY6 547 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 TNFRSF12AQ9NP84 129 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 B3GALT5Q9Y2C3 310 aa14.27□□□□□ -0.13
PTPRU-210ENST00000527027 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-210ENST00000527027 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 ALPK2Q86TB3 2170 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 SHISA9B4DS77 424 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 SLC28A1O00337 649 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 LYZL6O75951 148 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 FAM157CP0CG43 387 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 OR3A2P47893 321 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 P2RX1P51575 399 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 C21orf58P58505 322 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 RAC3P60763 192 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 PDE7AQ13946 482 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 PPA1Q15181 289 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 STK11Q15831 433 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 KLHL26Q53HC5 615 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 CFAP157Q5JU67 520 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 AGAP6Q5VW22 663 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 CBLN3Q6UW01 205 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 SSX8Q7RTT4 187 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 ATP6V1C2Q8NEY4 427 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 OR10H5Q8NGA6 315 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 ZFP90Q8TF47 636 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 JADE3Q92613 823 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 MUCL1Q96DR8 90 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 OTUB1Q96FW1 271 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-210ENST00000527027 CCT7Q99832 543 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 HOXD1Q9GZZ0 328 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 CXorf36Q9H7Y0 433 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 COQ10BQ9H8M1 238 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 DUSP22Q9NRW4 184 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 KLHL9Q9P2J3 617 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 ING1Q9UK53 422 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-210ENST00000527027 CDC42EP3Q9UKI2 254 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 EMCNQ9ULC0 261 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 ICAM5Q9UMF0 924 aa14.26□□□□□ -0.13
PTPRU-210ENST00000527027 IGHV4-30-2A0A087WSY4 118 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 H3BNH8 94 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 PHF1O43189 567 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 OIP5O43482 229 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 RGS14O43566 566 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 SDC1P18827 310 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 CDH11P55287 796 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 SUMO3P55854 103 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 TOMM34Q15785 309 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 TIMM23BQ5SRD1 257 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 C6orf52Q5T4I8 152 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 CLEC6AQ6EIG7 209 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 Q6ZSR9 355 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 P2RY8Q86VZ1 359 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF527Q8NB42 609 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 NOA1Q8NC60 698 aaKnown RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 GPR119Q8TDV5 335 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 CDS1Q92903 461 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 FAM120BQ96EK7 910 aaKnown RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 CHMP6Q96FZ7 201 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 FCRL1Q96LA6 429 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 MRGPRX4Q96LA9 322 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 ADAD1Q96M93 576 aaKnown RBP14.25□□□□□ -0.13
PTPRU-210ENST00000527027 TSSK3Q96PN8 268 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 STACQ99469 402 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 PSD2Q9BQI7 771 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 PIGUQ9H490 435 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 GIN1Q9NXP7 522 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 BAIAP2L1Q9UHR4 511 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 PRSS50Q9UI38 385 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 CARD8Q9Y2G2 431 aa14.25□□□□□ -0.13
PTPRU-210ENST00000527027 A0A096LNT2 108 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 IGHV3-15A0A0B4J1V0 119 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 FAM234BA2RU67 622 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 C9JVG2 144 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 GTPBP1O00178 669 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 ABCD4O14678 606 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 SLU7O95391 586 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 F12P00748 615 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 HMGN2P05204 90 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 PRKCAP17252 672 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms