RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 OR10H4Q8NGA5 316 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 OR4M2Q8NGB6 313 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 OR5M3Q8NGP4 307 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 CCL4L1Q8NHW4 92 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 TEAD3Q99594 435 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 IFT27Q9BW83 186 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 INPP5EQ9NRR6 644 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 DUSP22Q9NRW4 184 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 CYSLTR2Q9NS75 346 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 SATB2Q9UPW6 733 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 MAU2Q9Y6X3 613 aa10.27□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF860A6NHJ4 632 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 LRRC72A6NJI9 287 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PRR23D1E9PI22 279 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FMO6PO60774 539 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 LDB3O75112 727 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CA3P07451 260 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 HOXC4P09017 264 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PRR23D2P0DMB1 279 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 UGT2B7P16662 529 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF24P17028 368 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 F8A1P23610 371 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ERP29P30040 261 aaKnown RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 KIAA1024LP59773 190 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FAPQ12884 760 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FIGLAQ6QHK4 219 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 LRRC28Q86X40 367 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TMEFF1Q8IYR6 380 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CDK20Q8IZL9 346 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 SHISA5Q8N114 240 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 COX18Q8N8Q8 333 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CDRT4Q8N9R6 151 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 OR13C2Q8NGS9 318 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 BPIFA2Q96DR5 249 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 WACQ9BTA9 647 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 NDC1Q9BTX1 674 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PCOLCE2Q9UKZ9 415 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 SIGLEC7Q9Y286 467 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TMEM5Q9Y2B1 443 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ARHGEF17Q96PE2 2063 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 A0A087WV62 115 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 LOC105369274A0A096LPK9 316 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 E9PI62 339 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PLPP2O43688 288 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ORC5O43913 435 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FGF17O60258 216 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PLOD3O60568 738 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 MT-ND5P03915 603 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ATP1B1P05026 303 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 IL9P15248 144 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ARSBP15848 533 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CD53P19397 219 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF10P21506 573 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 THBS2P35442 1172 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ACTR1BP42025 376 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TNFRSF4P43489 277 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 GZMKP49863 264 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ACTR1AP61163 376 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 RPS7P62081 194 aaKnown RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 AMZ1Q400G9 498 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ARL9Q6T311 187 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ABHD13Q7L211 337 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 OR4N4Q8N0Y3 316 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CAMKVQ8NCB2 501 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TMEM52Q8NDY8 209 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TSACCQ96A04 125 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 KCTD12Q96CX2 325 aaKnown RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 STACQ99469 402 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TWSG1Q9GZX9 223 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 OR51V1Q9H2C8 321 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CERS4Q9HA82 394 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 LYRM4Q9HD34 91 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 MEPEQ9NQ76 525 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TRPV5Q9NQA5 729 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ACOXLQ9NUZ1 547 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 PILRAQ9UKJ1 303 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 ZMIZ1Q9ULJ6 1067 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 CA5BQ9Y2D0 317 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 MRPS2Q9Y399 296 aaKnown RBP10.26□□□□□ -0.77
HDAC9-228ENST00000524023 MED31Q9Y3C7 131 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 FANCMQ8IYD8 2048 aa10.26□□□□□ -0.77
HDAC9-228ENST00000524023 TRAV27A0A087WT01 109 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 INMT-MINDY4F8WBC2 141 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 H0Y8X5 98 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 LANCL1O43813 399 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PTP4A3O75365 173 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 EIF4EP06730 217 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 MRPL3P09001 348 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SBK2P0C263 348 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SAGP10523 405 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 POLR2CP19387 275 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NT5EP21589 574 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SLC2A5P22732 501 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NOS3P29474 1203 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NTSR1P30989 418 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 BMP8BP34820 402 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms