RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 RCAN2Q14206 197 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 LY6DQ14210 128 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 CYP51A1Q16850 503 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 PFKFB4Q16877 469 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 VPS26BQ4G0F5 336 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 PLA1AQ53H76 456 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 CYBRD1Q53TN4 286 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 RBM48Q5RL73 367 aaKnown RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 GPR107Q5VW38 600 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ATG9BQ674R7 924 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 FCRLBQ6BAA4 426 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 FRMPD2BQ6IN97 320 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MED27Q6P2C8 311 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 TRIM40Q6P9F5 258 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF773Q6PK81 442 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 TMEM207Q6UWW9 146 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF517Q6ZMY9 492 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MBOAT1Q6ZNC8 495 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 KCTD8Q6ZWB6 473 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 RPS27LQ71UM5 84 aaKnown RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 DDIASQ8IXT1 998 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 PTGR2Q8N8N7 351 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MFSD9Q8NBP5 474 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 OR13F1Q8NGS4 319 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 FLVCR1-AS1Q8TAF5 88 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 C9orf43Q8TAL5 461 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 FAM110BQ8TC76 370 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 GIPC3Q8TF64 312 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 CHPT1Q8WUD6 406 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ANKRD49Q8WVL7 239 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 CYGBQ8WWM9 190 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 NEIL2Q969S2 332 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 NRBF2Q96F24 287 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 PLEKHA8Q96JA3 519 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MAGED4Q96JG8 741 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 RDH12Q96NR8 316 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 OR2A5Q96R48 311 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 KCTD14Q9BQ13 255 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MESP1Q9BRJ9 268 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SLC39A3Q9BRY0 314 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 CRB3Q9BUF7 120 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 C1orf50Q9BV19 199 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SPRY4Q9C004 299 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SLC26A1Q9H2B4 701 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 NT5DC2Q9H857 520 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MID1IP1Q9NPA3 183 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 PFDN4Q9NQP4 134 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 STARD5Q9NSY2 213 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SACM1LQ9NTJ5 587 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 AHSPQ9NZD4 102 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 IL17BQ9UHF5 180 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 TEKT2Q9UIF3 430 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 LEF1Q9UJU2 399 aaPredicted RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 AURKCQ9UQB9 309 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 DNAJC15Q9Y5T4 150 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SLC22A7Q9Y694 548 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 MAU2Q9Y6X3 613 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SPTBN1Q01082 2364 aaKnown RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 HIVEP3Q5T1R4 2406 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 ANKHD1Q8IWZ3 2542 aaKnown RBP4.36□□□□□ -1.71
CSTF1-205ENST00000490539 SPTBP11277 2137 aa4.36□□□□□ -1.71
CSTF1-205ENST00000490539 HIVEP1P15822 2718 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 LOC105369274A0A096LPK9 316 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 A0A0A6YYC8 382 aaPredicted RBP4.35□□□□□ -1.71
CSTF1-205ENST00000490539 NSG1A0A0A6YYJ2 146 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 LOC102723532A0A0G2JNH3 316 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 ATP6AP2A0A1C7CYW4 349 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 A0A1W2PPW3 197 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 FEZF1A0PJY2 475 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 FAM234BA2RU67 622 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 KRT87PA6NCN2 255 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 ASPDHA6ND91 283 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 ARGFXA6NJG6 315 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 LRRC3CA6NJW4 275 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 I3L1I5 382 aaPredicted RBP4.35□□□□□ -1.71
CSTF1-205ENST00000490539 STX16O14662 325 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 MAGEB3O15480 346 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 KLK8O60259 260 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 UGDHO60701 494 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 COQ9O75208 318 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 GUCY1B2O75343 617 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 ATP6V1G1O75348 118 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 SLC22A3O75751 556 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 ATP6AP2O75787 350 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 SULT1C4O75897 302 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 SEC14L2O76054 403 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 NSA2O95478 260 aaKnown RBP4.35□□□□□ -1.71
CSTF1-205ENST00000490539 CLDN9O95484 217 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 MLYCDO95822 493 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 BCL10O95999 233 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 RPS17P08708 135 aaKnown RBP4.35□□□□□ -1.71
CSTF1-205ENST00000490539 IL6RP08887 468 aaPredicted RBP4.35□□□□□ -1.71
CSTF1-205ENST00000490539 OCM2P0CE71 109 aa4.35□□□□□ -1.71
CSTF1-205ENST00000490539 OCMP0CE72 109 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms