RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
ATG4B-218ENST00000479554 DUSP22Q9NRW4 184 aa12.88□□□□□ -0.35
ATG4B-218ENST00000479554 MED17Q9NVC6 651 aa12.88□□□□□ -0.35
ATG4B-218ENST00000479554 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
ATG4B-218ENST00000479554 MPDZO75970 2070 aa12.88□□□□□ -0.35
ATG4B-218ENST00000479554 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
ATG4B-218ENST00000479554 A0A1W2PQD3 144 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 C7orf72A4D263 438 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 SDHDO14521 159 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 AQP8O94778 261 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 CD8BP10966 210 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 LAMP1P11279 417 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 POU2F1P14859 743 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 ATP6V1C1P21283 382 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 CCKARP32238 428 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
ATG4B-218ENST00000479554 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 EXOSC6Q5RKV6 272 aaKnown RBP12.87□□□□□ -0.35
ATG4B-218ENST00000479554 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 CPTPQ5TA50 214 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 IL23RQ5VWK5 629 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-218ENST00000479554 NATD1Q8N6N6 113 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 OR56A1Q8NGH5 318 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 B4GALNT2Q8NHY0 566 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 OR5P2Q8WZ92 322 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 C3orf30Q96M34 536 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 OR52B2Q96RD2 323 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 PIGUQ9H490 435 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 MRGBPQ9NV56 204 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 FBXO34Q9NWN3 711 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-218ENST00000479554 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 ZNF226Q9NYT6 803 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
ATG4B-218ENST00000479554 GOLGA8QA0A0J9YX86 632 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 A0A1W2PPR1 153 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 GOLGA8OA6NCC3 632 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CFAP73A6NFT4 308 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 GOLGA8NF8WBI6 632 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 SYNGR4O95473 234 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 C6orf47O95873 294 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 PLGP00747 810 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CGAP01215 116 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 KRT16P08779 473 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 NCF2P19878 526 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CALB2P22676 271 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ME2P23368 584 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 EPHA3P29320 983 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 UGT2B10P36537 528 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 FOXD4Q12950 439 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 TP53BP2Q13625 1128 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 GUSBP1Q15486 140 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CD226Q15762 336 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ZNF527Q8NB42 609 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 OR10D3Q8NH80 312 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 TUBGCP3Q96CW5 907 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ADGRG7Q96K78 797 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 PRPF18Q99633 342 aaKnown RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 NPAS1Q99742 590 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ACTRT3Q9BYD9 372 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 WDR55Q9H6Y2 383 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 NEUROD4Q9HD90 331 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ARL8BQ9NVJ2 186 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 GIN1Q9NXP7 522 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 C6orf203Q9P0P8 240 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ARMCX1Q9P291 453 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-218ENST00000479554 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
ATG4B-218ENST00000479554 ABCA4P78363 2273 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 E9PBE3 544 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 C16orf97H3BN30 126 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 SLC22A2O15244 555 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 CFLARO15519 480 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PRPS1L1P21108 318 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 ADSLP30566 484 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 SLC6A8P48029 635 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 CTBP2P56545 445 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 RAC1P63000 192 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 ADAM8P78325 824 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 ESPNLQ6ZVH7 1005 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 ZNF550Q7Z398 422 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 KRTCAP2Q8N6L1 136 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms